Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00235 ATGTCTTCTTCTTTTTCGCCATCCATGGCTGCTGTTTTCTGCTTGTTTTTTGTGTTAATTGAAGGGGCTTTTGCACAGCTCTCTCCTACTTTCTATTCCACCTCTTGCCCTAATTTAGCCACCATTGTTAGCGGCGTGGTCGCACAATCTATGAATAGCGATGACCGAACGGGTGCTAAGCTCATTCGTCTCCACTTCCACGACTGTTTCGTCAATGGTTGCGACGCATCTATTCTGCTCGATAACGCTGATGGAATATTGAGCGAAAGAGACACACCACAAAATCAAGGGATAACAGGATTGAACATCGTTGATGATATAAAAACTGCAGTCGAAAATGCGTGTCCAGGGATTGTCTCCTGCGCCGATATCTTAGCCCTTTCGTCTCAAATTGCAATTGATTTGGCTCAAGGGCCTCGGTACAGTGTCCCGTTGGGGAGAAGAGACAGCACAACAGCCAACAGAGCAGGGACAGCTGGTATTCCTGGCCCAAATGATGCCCCTAGCAGAGTAATACAATTGTTCGATAACGTACAACTTAATACAGCTGATGTTGTTGCTTTATCAGGTGCGCATACGTTTGGTAGAGCAAGATGTCGTTTCTTACAAAATCGTCTCTATAACTCTAACGGATCTGGCGCCCCAAACGAGGAGATCGACCCTACATACTTGGCGACGCTTCAAGCAGCATGCCCACAAGGTGCGAACTTGGATAACTTCAACAACCTAGATCCGACAACCCCCGACACCTTCGATGATAACTACTACCGCAACCTAGTTAATCGTCGTGGCCTCCTTCAAACCGATCAAGATCTCTTCACCCAACCTGCCACCTCCGGTCTAGTCACCACCTTCGCCAACAGCCAATCCGAGTTCTTCGCCGCCTTTTCGGACTCTGTGATAAAGATGGGAAATATCAGCCCTTTGACAGGATCGAGTGGACAAATTAGAGCAAATTGTCATTTCGTTAATGCCGCCTAG 981 47.4 MSSSFSPSMAAVFCLFFVLIEGAFAQLSPTFYSTSCPNLATIVSGVVAQSMNSDDRTGAKLIRLHFHDCFVNGCDASILLDNADGILSERDTPQNQGITGLNIVDDIKTAVENACPGIVSCADILALSSQIAIDLAQGPRYSVPLGRRDSTTANRAGTAGIPGPNDAPSRVIQLFDNVQLNTADVVALSGAHTFGRARCRFLQNRLYNSNGSGAPNEEIDPTYLATLQAACPQGANLDNFNNLDPTTPDTFDDNYYRNLVNRRGLLQTDQDLFTQPATSGLVTTFANSQSEFFAAFSDSVIKMGNISPLTGSSGQIRANCHFVNAA 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2843037 2844579 - Bma025007.1 Bma07g00235 85372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00235 326 Gene3D Peroxidase, domain 2 162 303 - -
Bma07g00235 326 PANTHER PEROXIDASE 58 18 324 - -
Bma07g00235 326 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Bma07g00235 326 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 Gene3D - 30 324 - -
Bma07g00235 326 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma07g00235 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Bma07g00235 326 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601|GO:0042744
Bma07g00235 326 PANTHER PEROXIDASE 72-RELATED 18 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00235 Bma-Chr7:2843037 Bma06g00110 Bma-Chr6:1540628 1.69E-91 dispersed
Bma07g00235 Bma-Chr7:2843037 Bma08g01042 Bma-Chr8:49536459 4.14E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00235 K00430 - ini:109182362 371.318