Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00281 | ATGGTGGGTCTACGCGATGTCTTTGTTGTAGCACCCGCCTCCTCCTTCAACCCTAATAATCATGTTCATCATCCGCATGAAACCATCAATCCCGATCATCACTCCTTTAACAGCTCAAACCAAGCGACGGCCCTCGGAGTCGGCGTCGGCGTTATTCCTCTCCTCACTGCGGCTCACCTCGCTCCGCATGGCGTTGTCGGTGAAGATCAAGAGGGTTTAGTGGGTAGAAGCCGAGGTGGTGGAGTTCAGCTATGGCAGACTCCGCAGTTAAACCATTTTCACTACCTGAAGAAACAAGCTCCTTTCGATAATGATAACAATTCTGCAAATTTAGTCCTGAGTGGAGGTGGTAACTTTGGAGGAGCTTCTGTGTCTGAGTCTGCTCCTTCATCGACCTTGACTTGCCAAGACTGTGGAAATCAAGCGAAGAAAGATTGTAGCCATAGGCGTTGCAGAACTTGCTGCAGAAGTCGAGGTTTCGATTGTTCAACTCATGTTAGAAGTACTTGGGTGCCAGCTGCTCGCCGGAGAGAGCGGCAATCAATGACGGTCGGTGCTTCTCCGGCCGCAGGGTCTTCTGCATCGACCTCCGGCGCCAAGAAACCCAGACTCATAACTTCACAAACAACAACCACCTCTCATACTTCTACTTCTAACACCACTCCTAGAAGCTTTGACACAAGCTCCAGCCAGCCAGATGTAAGTTTTAAGGAGTCATTTCCTGGTCAAGTTCGAGCGCCGGCAGTTTTCAAATGCGTTAGAGTGACGGCAGTGGAAGATGGAGAAGACGAGTACGCTTACCAAGCAGTCGTCCAAATCGGCGGCCATGTTTTCAAAGGTTTTTTGTACGATCAAGGTGTAGAATCAAGAGGTGGGTTTCCAAACATGTCTGATCTGCATTTAAGCTGTAGAAGTGACGGAGCTGCCGGAGATGTCATAGAATCCGGCGAAGGCGGAGGAGGAAGAAATAGAGCCTCATCTCCAGTTCTTAATCATCCCTTGGATGTTTATGCGGCCTCCGGCGGCGGAGGATTGCTTGGAGGTTCTAGCTATGGTAACCCTATGAACTCATAA | 1074 | 49.81 | MVGLRDVFVVAPASSFNPNNHVHHPHETINPDHHSFNSSNQATALGVGVGVIPLLTAAHLAPHGVVGEDQEGLVGRSRGGGVQLWQTPQLNHFHYLKKQAPFDNDNNSANLVLSGGGNFGGASVSESAPSSTLTCQDCGNQAKKDCSHRRCRTCCRSRGFDCSTHVRSTWVPAARRRERQSMTVGASPAAGSSASTSGAKKPRLITSQTTTTSHTSTSNTTPRSFDTSSSQPDVSFKESFPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVQIGGHVFKGFLYDQGVESRGGFPNMSDLHLSCRSDGAAGDVIESGEGGGGRNRASSPVLNHPLDVYAASGGGGLLGGSSYGNPMNS | 357 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3479871 | 3481053 | + | Bma025062.1 | Bma07g00281 | 85418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00281 | 357 | Pfam | Domain of unknown function (DUF702) | 132 | 288 | - | - | |
Bma07g00281 | 357 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 2 | 356 | - | - | |
Bma07g00281 | 357 | MobiDBLite | consensus disorder prediction | 173 | 238 | - | - | |
Bma07g00281 | 357 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
Bma07g00281 | 357 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 2 | 356 | IPR007818 | GO:0003700|GO:0006355 | |
Bma07g00281 | 357 | TIGRFAM | LRP1_Cterm: LRP1 C-terminal domain | 240 | 287 | IPR006511 | - | |
Bma07g00281 | 357 | MobiDBLite | consensus disorder prediction | 185 | 237 | - | - | |
Bma07g00281 | 357 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 134 | 176 | IPR006510 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g01484 | Bma07g00281 | CCT | |
Bma07g00281 | Bma14g00754 | CCT | |
Bma07g00281 | Bma11g00303 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00281 | Bma-Chr7:3479871 | Bma01g00741 | Bma-Chr1:6793248 | 7.09E-46 | dispersed | |
Bma11g00303 | Bma-Chr11:2862855 | Bma07g00281 | Bma-Chr7:3479871 | 3.41E-165 | wgd | |
Bma14g00754 | Bma-Chr14:8388277 | Bma07g00281 | Bma-Chr7:3479871 | 2.40E-95 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57589 | PF05142 | DUF702 | 3.70E-62 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00281 | - | - | jre:108994634 | 412.535 |