Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00282 CAGGAAAAGGTGCAAACTAAGGAAGAGACGCAACAAGTACGAAGTGGGGTTTATGGAGGAGTTTGTGCAATATGCTTGAATAAGATAGTTCTTGAAGAAACTGCTCTTATTAAAGGTTGCGAGCACGCCTACTGTGTGACGTGCATCCTTCAGTGGGCTTCATACAGTCAGAAACAAGCTTGCAAATGCCCTCAATGTAAATATCCCTTCGAGTCCCTGAATGTTCATCGAACACTGGATGGAAGGATCCAAGATTACATGTTTGAGGAGAGTGTGTGTCTACTTCTAAGAGCCTCGTGGTTTAAGCCTATGATTGTGGAGGATCGCGAAGAAGCTTACGATGATCGTGAAGATTACTTTGAGTATGAAGACGAGGAGGATGAACTTGAGGAAGATTACTTTGATCGCCCATCTTCAAGTCTCCGTATTGGCAATCGAAGATGGGGAGACAGTGGATATGTGAGGGCAGGGCACCAAGAAGCAAGGCCTGTGTGTCGACAAAATACTCAAGACTCAGGCGGGACCTCTTCCCATGAACCTAAGAGGAAAGAGGCTGTAAATGATAAAATGGGGAGACGAGCAAAAAGGGCGCTTAAAAGAGAAGCTGCGGACAAGGCAGCTGCAGCCAAACATGTGGAACATCTGGCAAGGTTAGGCAGGCAGTGA 666 46.4 QEKVQTKEETQQVRSGVYGGVCAICLNKIVLEETALIKGCEHAYCVTCILQWASYSQKQACKCPQCKYPFESLNVHRTLDGRIQDYMFEESVCLLLRASWFKPMIVEDREEAYDDREDYFEYEDEEDELEEDYFDRPSSSLRIGNRRWGDSGYVRAGHQEARPVCRQNTQDSGGTSSHEPKRKEAVNDKMGRRAKRALKREAADKAAAAKHVEHLARLGRQ 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3486670 3488691 + Bma025063.1 Bma07g00282 85419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00282 221 ProSiteProfiles Zinc finger RING-type profile. 22 67 IPR001841 -
Bma07g00282 221 MobiDBLite consensus disorder prediction 159 221 - -
Bma07g00282 221 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 220 - -
Bma07g00282 221 Pfam Ring finger domain 22 67 IPR001841 -
Bma07g00282 221 ProSitePatterns Zinc finger RING-type signature. 40 49 IPR017907 -
Bma07g00282 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 91 IPR013083 -
Bma07g00282 221 SUPERFAMILY RING/U-box 21 72 - -
Bma07g00282 221 MobiDBLite consensus disorder prediction 176 221 - -
Bma07g00282 221 SMART ring_2 22 66 IPR001841 -
Bma07g00282 221 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 5 220 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00282 Bma11g00304 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00282 Bma-Chr7:3486670 Bma14g01311 Bma-Chr14:23971671 9.08E-06 dispersed
Bma11g00304 Bma-Chr11:2866556 Bma07g00282 Bma-Chr7:3486670 2.89E-116 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00282 - - hbr:110658728 261.151