Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00293 ATGCATACGTTTTACAAGCTGACAGAAGATGAGAACAGAGTGGATGACTATATGAGTTCACAGAAATACATAAATGTTAAAATGAGATCAATTCTAATAGACTGGTTGATCGAAGTTCATCGTAAATTTGAACTCTGCCCAGAAACTCTTTACTTGACTGTACATATTGTTGATAGATTTCTCTCCATCACAAAAGTTCAAAGAACAGAACTTCAATTAGTTGGCATAAGCTCCATGCTCTTGGCTTGCAAGTACGAAGAAATCTGGGCTCCAGGGGTTAATGATTTTGTAAGCATATCTGCTAATGCTTACGTGAGAGAACAAATTCTTGTAATGGAGAAAGCAATTCTTGAAAAGCTTCAATGGCGTTTAACAGTTCCAACTCCTTACGTTTTCCTCGTTCGGTACATTAAAGCTTCAGAATCATCTGATATGGAGATGGAAAATACAGTGTATTTTCTTGCTGAACTCGGCTTGATGCATTATCCCACAATGGTTTCTCATCGCCCTTCCATGGTTGCCGCTTCTGCTGTTTATGCCGCAAGATGTACACTTGATAAACGTCCTTCTTGGACTGCAACTCTAGAACACCACACAGGCTACTGCGAAAACCAACTAATCGACTGCGCCAAAATCTTGGTTGGCTTGCATGTGGGAGCGGCGGAGAACAAGCTCAGAGCAGTATATCGTAAATTCAAGAACCACGATCGTTGTGCAGTTGCTCTTCTCGATCCAGCAACCAAGTTAAGTGGACATTCTTTGGATTTCCACTAA 774 40.83 MHTFYKLTEDENRVDDYMSSQKYINVKMRSILIDWLIEVHRKFELCPETLYLTVHIVDRFLSITKVQRTELQLVGISSMLLACKYEEIWAPGVNDFVSISANAYVREQILVMEKAILEKLQWRLTVPTPYVFLVRYIKASESSDMEMENTVYFLAELGLMHYPTMVSHRPSMVAASAVYAARCTLDKRPSWTATLEHHTGYCENQLIDCAKILVGLHVGAAENKLRAVYRKFKNHDRCAVALLDPATKLSGHSLDFH 257
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 3670622 3671735 - Bma025071.1 Bma07g00293 85430
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00293 257 SMART cyclin_7 34 118 IPR013763 -
Bma07g00293 257 SMART cyclin_7 131 215 IPR013763 -
Bma07g00293 257 ProSitePatterns Cyclins signature. 29 60 IPR006671 -
Bma07g00293 257 Gene3D - 119 254 - -
Bma07g00293 257 CDD CYCLIN 125 214 IPR013763 -
Bma07g00293 257 PANTHER CYCLINS 1 247 IPR039361 -
Bma07g00293 257 PANTHER CYCLIN-B1-4 1 247 - -
Bma07g00293 257 CDD CYCLIN 28 117 IPR013763 -
Bma07g00293 257 SUPERFAMILY Cyclin-like 128 247 IPR036915 -
Bma07g00293 257 Gene3D - 14 118 - -
Bma07g00293 257 Pfam Cyclin, N-terminal domain 7 124 IPR006671 -
Bma07g00293 257 SUPERFAMILY Cyclin-like 13 124 IPR036915 -
Bma07g00293 257 SMART Cyclin_C_2 127 246 IPR004367 -
Bma07g00293 257 Pfam Cyclin, C-terminal domain 127 244 IPR004367 -
Bma07g00293 257 PIRSF Cyclin_A_B_D_E 1 256 IPR039361 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01330 Bma-Chr5:52864423 Bma07g00293 Bma-Chr7:3670622 6.19E-113 dispersed
Bma07g00293 Bma-Chr7:3670622 Bma02g00209 Bma-Chr2:2255994 4.11E-49 dispersed
Bma09g00495 Bma-Chr9:41061080 Bma07g00293 Bma-Chr7:3670622 2.55E-179 transposed
Bma11g00315 Bma-Chr11:2966020 Bma07g00293 Bma-Chr7:3670622 1.12E-148 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00293 K21777 - twl:120008028 372.859