Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00315 ATGGCGGCGTTCGACGAAGCTTTGAACGATGGGGTCGACGTAATTTCGGCGTCCATCGGCCTGCCACCGCCTTTAGCTCCGCTGTACGCGTCGGCGCTTGATATTGGTTCGTTCCACGCAATGCAGCTTGGCGTCACCGTCGTTTTCTCGGCTGGTAACGACGGTTCTGACCCGTCTCTGGTTAAGAATGTTTCGCCATGGAGCATCTGCGTTGCTGCTTCCTCCATAGATCGAAGCTTTCCCACCACAATAATCTTGGACAACACCTTATCCTTCACTGGAGAAGGCTTCATTAGGAAGGAGATAAAGGCACTTTTGATCGATGCATTGGCTTATTTTGTCGATGGGATTTGTCTGGAGAGAAATAGAATTCCGGGTCGTTCGGCAAAGGGGATGGTAGTGTTATGCTTCTCGACCATGGGACCCGTCTCTCTATTCGCGGCCAAGAATCTCAATGCCTCGGGGTTGGTAGTTGTCGCGCCAATGACTAGGCAACTCGCCGAGTTCACTATCATCCCCATTGTTAGTGTTGATCTTGAAGTAGGCACTAAGATAAAGAACTATCTCTCTGACTCTCCAACGCTTCCATTGTTGCAGATTCGGAAGAGCCAAACCGTCGTCGGAAAGTCGTTGGCTCCGACCGTTGCCTACTTTTCTTCGAGAGGACCGAACTCTTTAACTCCACACATTCTCAAGCCAGATATTACTGCCCCGGGAGTGAATATATTAGCAGCTTGGCCTCACGAAACTCCTCCGACCGTGACTCCGAATGGTGGCAACTTCGTGAAGTGGAATTTTCAGTCCGGTACGTCAATGTCATGCCCTCACGTAGCTGGAGTGGTGGCCCTCATCAAATCGGTTCATCCGAAGTGGTCTCCGGCAGCCATTAGATCTGCTTTAATCACCACAGCCTCCGATCGAGACACCTCCCTAGGCATCATTCAGGCTGGAGGCTCGACCAAATCATCTGATGCCTTCGACTTAGGTGGTGGTCACATCAATCCTCTCAAAGCTATGGATCCCGGCCTTGTTTACGACATAAAATCTAGCGATTACATTATCTTCTTGTGCAACTTAGGCTACACTCAAGAACAAATAAGGACGATCGCTCTTCCGAATACCGATACTTGCTGCAAAAAAGCCGAAAAAATGAGCATCAGCTCTATCAATTACCCCTCTATTTCTGTCCCGAATCTCGAATCTACCGTGACGATCAAAAGAACAGTCAGAAACGTTTCGGCAAAAAAGAATGCGATATATTTCGTGTCCGTGGATAGTCCGGCCGGCGTTGAAGTGGTCGTATGGCCGAGGATTTTGATATTTTCTTGGTTCAACGACGAAAACTCGTACTATGTGACTCTTAGGCCAGCGAAGAAGTCTCAAGGAAGATACAATTTTGGAAAGATTGTATGGTCGGATGGTTTTCACAGTGTTAGAAGTCCATTGGTTGTTTGTGTGAACAACACTTACAGTGGAGGTGATTCTGCTGCTACAAATGCTGATCAGTTCTTCTCTCGTACCACCCTGTAA 1530 48.3 MAAFDEALNDGVDVISASIGLPPPLAPLYASALDIGSFHAMQLGVTVVFSAGNDGSDPSLVKNVSPWSICVAASSIDRSFPTTIILDNTLSFTGEGFIRKEIKALLIDALAYFVDGICLERNRIPGRSAKGMVVLCFSTMGPVSLFAAKNLNASGLVVVAPMTRQLAEFTIIPIVSVDLEVGTKIKNYLSDSPTLPLLQIRKSQTVVGKSLAPTVAYFSSRGPNSLTPHILKPDITAPGVNILAAWPHETPPTVTPNGGNFVKWNFQSGTSMSCPHVAGVVALIKSVHPKWSPAAIRSALITTASDRDTSLGIIQAGGSTKSSDAFDLGGGHINPLKAMDPGLVYDIKSSDYIIFLCNLGYTQEQIRTIALPNTDTCCKKAEKMSISSINYPSISVPNLESTVTIKRTVRNVSAKKNAIYFVSVDSPAGVEVVVWPRILIFSWFNDENSYYVTLRPAKKSQGRYNFGKIVWSDGFHSVRSPLVVCVNNTYSGGDSAATNADQFFSRTTL 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3797293 3799314 + Bma025094.1 Bma07g00315 85452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00315 509 Gene3D - 356 486 - -
Bma07g00315 509 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 1 482 - -
Bma07g00315 509 CDD PA_subtilisin_like 83 194 - -
Bma07g00315 509 Pfam Subtilase family 2 307 IPR000209 GO:0006508|GO:0008236
Bma07g00315 509 Gene3D - 77 207 - -
Bma07g00315 509 Gene3D Peptidase S8/S53 domain 1 352 IPR036852 GO:0004252|GO:0006508
Bma07g00315 509 SUPERFAMILY Subtilisin-like 2 343 IPR036852 GO:0004252|GO:0006508
Bma07g00315 509 Pfam Fibronectin type-III domain 389 484 IPR041469 -
Bma07g00315 509 ProSiteProfiles Serine proteases, subtilase domain profile. 1 339 - -
Bma07g00315 509 ProSitePatterns Serine proteases, subtilase family, serine active site. 269 279 IPR023828 -
Bma07g00315 509 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 482 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00315 Bma-Chr7:3797293 Bma05g00427 Bma-Chr5:13663105 9.14E-88 dispersed
Bma07g00315 Bma-Chr7:3797293 Bma08g00694 Bma-Chr8:42238206 1.66E-102 transposed
Bma07g00315 Bma-Chr7:3797293 Bma05g00545 Bma-Chr5:29815588 1.18E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00315 - - cic:CICLE_v10014478mg 651.744