Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00320 ATGAATGAAGCAACTCCTAAAAGCCTTGGTTGTATTTGTCCACAAGTCAAGTTCACATTCAACCGCGTCTACCAGTCAATCCTCCTTCTCTCTTCTCTCACTTCCAACGCTAACGTGAAAAGCGGGTTCTCAAATGCCACCACCGGCGACGTCGAAAAAATCTACGGCGTCTTTCTCTGCCGCGCTGATGTTCCTCCGGCAGCTTGTCAAGAATGCTCTGCCACCGCAGAGCAAGAATTACAGCGAATTTGCCAAACTTCGAAAGTAGCTTCAATCTGGTACGACCAGTGCATGCTTAGTTATTCCAATCAGTCAATCTTCTCCACTCTCACAGACTGGCCGATGATCAAATTGATAAACTCAACGAACGTCACTGACCCTGTGCGGTTCAACCAGTTTGTGGGTGATATTTTGAATAGATTATCCACAGAAGCGGCAAACACTCCTTCGGTAAAGAAGTTTGCGGCCACCGAAGAAAATTTTACGAGCACGCAGACCTTGTACAGCTTTGTCCAGTGTACGCCGGTTCTCACCACTCACGACTGCGACACCTGTATCCGTCGAGCCATGTCCGTTCTTCTTCCGACGTATCCAATAGGCGGAAATGTTCTGTATCCGAGCTGTAATATTAGATATGAATTCTATCCATTCTACAACGTGACAGCGGCGAGAGAAGAAAGTCAGCCTCCTCCTCCACCTCCACCGCCACCGAAAAAGAAAATTTCAGCGGTTACAATTATCGCCCTTTTCGTCCCAGTCTTGGTCTCTCTAGTGTTGCTCTCGATCTGCTTCTGCATACTGAGAAGAAGGAGAGCCAAAGGCAGAGCATTCAAGTCTTTTATGGAAGATAATGATGGAGATAAAATGTCAGCCATCGGTTCGTTGCAATTCGACTTCGCAACGATTGAAGCTGCCACCAACAAATTTTCGTCCGATAACAAGATTGGCGAAGGAGGATTCGGAGCTGTTTATAAGGGTGTTCTTCCTGACAGGGAAGAAATAGCAGTAAAGAGACTATCAGGAAGTTCCACTCAAGGCGAAGTGGAGTTCAAGAATGAGGTCGTCGTTGTGGCCAAGCTTCAACACCGGAATCTGGTGAGGCTCCTCGGATTTTGCTTGGAACGAAACGAAAGAATCCTCGTCTATGAATACGTCCCCAACAAAAGCCTCGACTACTTTCTATTTGATTCTGAAAAGAAAAGGCAATTGAATTGGACCCAACGATACAAGATCATAGTCGGGATAGCTCGAGGAATTCTGTATCTTCACGAAGACTCGAGACTCACGATCATTCATCGAGATCTCAAAACCAGCAATGTGTTATTAGACGCCAACATGAACCCAAAAATTTCAGACTTTGGAATGGCAAGGATCTTCGTGGTTGATCAAACGCCGACCAACACAAATCGAATAGTTGGAACATATGGTTATATGTCGCCGGAATATGCAATGCATGGCCAGTTTTCAGTGAAGTCGGATGTGTTCGGCTTTGGAGTTTTGGTTCTTGAAATCCTTACTGGGAAAAAGACCAGTTCTTTCTATCGATCAGATAAAGCAGAGAACCTCTTGAGCTACGTTTGGAAGCATTGGAGGAATGGAACGGCGATGAATATATTGGATGAAACGTTGAAGGATTTAGGTTACGCGAGAGAAGAAGTGATGAGGTGCATTCAAATGTGTTTGCTGTGCGTTCAGGAAGATCCAGTGAACAGACCAACAATGGCTACCGTAGTTCTGATGCTTACCAGTTACTCTATGACTCTCTCTACCCCTCAGCGGCCTGCGTTTTGTATTGACAGCCGAACCCAGGCTAAAGCATCGGAAAGCAAGCCACAGTCCGATGCGTCGACAAGCACTTCGGTTCCATTGTATAATACTGAAATAGTCCCTCGCTAG 1896 45.89 MNEATPKSLGCICPQVKFTFNRVYQSILLLSSLTSNANVKSGFSNATTGDVEKIYGVFLCRADVPPAACQECSATAEQELQRICQTSKVASIWYDQCMLSYSNQSIFSTLTDWPMIKLINSTNVTDPVRFNQFVGDILNRLSTEAANTPSVKKFAATEENFTSTQTLYSFVQCTPVLTTHDCDTCIRRAMSVLLPTYPIGGNVLYPSCNIRYEFYPFYNVTAAREESQPPPPPPPPPKKKISAVTIIALFVPVLVSLVLLSICFCILRRRRAKGRAFKSFMEDNDGDKMSAIGSLQFDFATIEAATNKFSSDNKIGEGGFGAVYKGVLPDREEIAVKRLSGSSTQGEVEFKNEVVVVAKLQHRNLVRLLGFCLERNERILVYEYVPNKSLDYFLFDSEKKRQLNWTQRYKIIVGIARGILYLHEDSRLTIIHRDLKTSNVLLDANMNPKISDFGMARIFVVDQTPTNTNRIVGTYGYMSPEYAMHGQFSVKSDVFGFGVLVLEILTGKKTSSFYRSDKAENLLSYVWKHWRNGTAMNILDETLKDLGYAREEVMRCIQMCLLCVQEDPVNRPTMATVVLMLTSYSMTLSTPQRPAFCIDSRTQAKASESKPQSDASTSTSVPLYNTEIVPR 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3862097 3868285 - Bma025098.4 Bma07g00320 85457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00320 631 ProSiteProfiles Protein kinase domain profile. 309 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00320 631 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Bma07g00320 631 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 609 - -
Bma07g00320 631 Gene3D - 9 105 IPR038408 -
Bma07g00320 631 Gene3D - 114 217 IPR038408 -
Bma07g00320 631 Gene3D Transferase(Phosphotransferase) domain 1 385 595 - -
Bma07g00320 631 Pfam Salt stress response/antifungal 123 214 IPR002902 -
Bma07g00320 631 Pfam Salt stress response/antifungal 28 104 IPR002902 -
Bma07g00320 631 SUPERFAMILY Protein kinase-like (PK-like) 295 609 IPR011009 -
Bma07g00320 631 ProSiteProfiles Gnk2-homologous domain profile. 4 106 IPR002902 -
Bma07g00320 631 ProSiteProfiles Gnk2-homologous domain profile. 112 217 IPR002902 -
Bma07g00320 631 MobiDBLite consensus disorder prediction 601 631 - -
Bma07g00320 631 SMART serkin_6 309 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00320 631 MobiDBLite consensus disorder prediction 601 625 - -
Bma07g00320 631 Gene3D Phosphorylase Kinase; domain 1 274 384 - -
Bma07g00320 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Bma07g00320 631 CDD STKc_IRAK 315 582 - -
Bma07g00320 631 Pfam Protein tyrosine and serine/threonine kinase 312 579 IPR001245 GO:0004672|GO:0006468
Bma07g00320 631 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 17 609 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00320 Bma-Chr7:3862097 Bma07g00326 Bma-Chr7:4240191 0 dispersed
Bma07g00323 Bma-Chr7:4099429 Bma07g00320 Bma-Chr7:3862097 4.37E-99 dispersed
Bma07g00320 Bma-Chr7:3862097 Bma07g00322 Bma-Chr7:4081161 5.51E-87 proximal
Bma06g01071 Bma-Chr6:47562279 Bma07g00320 Bma-Chr7:3862097 4.92E-84 transposed
Bma06g01087 Bma-Chr6:47708158 Bma07g00320 Bma-Chr7:3862097 6.35E-84 transposed
Bma14g01896 Bma-Chr14:40558616 Bma07g00320 Bma-Chr7:3862097 4.38E-109 transposed
Bma15g00789 Bma-Chr15:16806892 Bma07g00320 Bma-Chr7:3862097 2.39E-125 transposed
Bma11g00349 Bma-Chr11:3443747 Bma07g00320 Bma-Chr7:3862097 3.03E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66589 PF07714 PK_Tyr_Ser-Thr 1.20E-48 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00320 - - jcu:105649397 699.123