Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00324 ATGCTTGTAATGGCGTCTACCCTCTTCTCGCAGTCTCTTCTTCTCGTCATTTTCTTTTTCATCGCCCACCTTAACGCTCAGCCCAGCTTCCTTTACCACTTCTGCATTGACAGGAACGGAAACTACACAGCCGACGACGCCTACAACGTCAACCTCCTCCACCTTCTCTCCGCCATTTCCACCAACGACAACATCGACTATGGTTTTTACAATTTCTCTCTAGGCCAGAACTTTGATGCTGTTTACGCGATTGCACTTTGCAGAGGCGACGTCGACGCTGTCGCTTGCCGGAGCTGCCTCAATGACTCTAGATACCTCCTCACGCACCGCTGTCCGAATCAGAGGGAAGCTATTGGGTGGTACGATAACTGTATGTTAAAATACTCCGACCGGAGGATACTTGGATTAATGGAGACTGATCCATCTTACCGATTTTGGGTCATAGATAATGTCACGAACGTGGATCAATATAGCCGAGATCTCAGGACATTGTTGGATGATTTGAAAGGTACCGCTGCGGCAGGTAACTCTCAGTTAAAATATGCGGCGGGAAGTCGGGCGGCGCCGGATTTCGAGACTATCTACGCCGCTGTACAGTGTACGCCTGATTTATCGGAGCTAGAGTGCAGCGATTGCTTGGATGATGCAATTTTGCAACTTCAACCTTGTTGTCCGACCAGTGTTAGAGTGGGTTCCCCTAGTTGTAATATCAGATATCAGCAGTCTCGCTTCTATCACTCTTCTCCGAATGTTCCGCCAGAATCGCCCCCGCCCCCAGTTTCTCCTCCTACTCCGCCGTCCCTGACCAGTGTAGACGAAGAAGGAAAGAAGAAGAATCCATCTCGAACTGTAATCGCCGTAGTTCTGCCGATTGTCGGTGGGTTGGTTGTAATTTCTTTGATTTGTATCATCGTCTATTCAAGAAGGAAGAAAAGCGTCGAAACAGCTGCTGATATAAAAAGGGAAGAATCCTTGCAATTGGACTTCCAAACCATTAAAGACGCCACGGAGAACTTTTCTGAAGAAAATAAACTTGGACAAGGAGGATTTGGAGCTGTTTACAAGGGAAAGCTTCCCGATGGACAAGACATAGCAGTGAAAAGGCTGGCTGTAAATTCTTTGCAGGGAGACGCAGAGTTCAAAAATGAAGTCCTCCTAGTTGCCAAGCTACAACACAGGAATTTAGTAACACTTCTTGGATTCTGTTTGGAGAGAAAGGAAAGGCTGCTAGTCTACGAGTTCGTTCCGAACGGCAGCCTCGATCATTTCATCCTCGATCCGGCAAAACGCCGCACCTTGACCTGGGAAAACCGATACGAAATCATCTCGGGGATTGCTCGTGGACTCCTTTACCTGCATCAAGACTCTCAGCTCAAAATTATTCATCGAGATCTGAAAGCTAGTAATGTGTTACTAGATGCAGCATTGAGACCCAAAATTTCGGATTTCGGCATGGCAAAATTGTTCGCACAAGAACAGACTCACGACAAGACATCCAAAATTGCAGGAACATACGGCTATATGGCTCCCGAGTATGCACTAGGCGGCAAATTTTCAGCCAAGTCAGACGTATATAGTTTTGGTGTCATGGTTTTGGAGATCGTCACTGGCCTAAGTCAACAGAGATTGATAAACCAAAATGGGGAGACCACAGAACATCTTCTGAGCTATGCATGGAGAAATTGGAAGGAAGGGGAAGTCACCAATCTTGTAGACCCTGTTATGGAAGCATGTTTGACAAATGAAATGATGAGATGCATCCACATAGGGTTGCTCTGTGTTCAAGAAAACTCAACTAACAGACCAACCATGGATTCGGTTGTTCTCATGCTTAGTAGCGACTCACTCCGTCTCGTGATTCCATCACAGCCTGCATTTTTACTGCATAGCAACGTTGAACCAAACAGATCATCCGTAAGGCTTGTCAGACAAGTCGACGTTGAAGTGTCTGCAAATGAGGCTTCGATCACTGATCTATATCCCCGCTAA 1989 46.56 MLVMASTLFSQSLLLVIFFFIAHLNAQPSFLYHFCIDRNGNYTADDAYNVNLLHLLSAISTNDNIDYGFYNFSLGQNFDAVYAIALCRGDVDAVACRSCLNDSRYLLTHRCPNQREAIGWYDNCMLKYSDRRILGLMETDPSYRFWVIDNVTNVDQYSRDLRTLLDDLKGTAAAGNSQLKYAAGSRAAPDFETIYAAVQCTPDLSELECSDCLDDAILQLQPCCPTSVRVGSPSCNIRYQQSRFYHSSPNVPPESPPPPVSPPTPPSLTSVDEEGKKKNPSRTVIAVVLPIVGGLVVISLICIIVYSRRKKSVETAADIKREESLQLDFQTIKDATENFSEENKLGQGGFGAVYKGKLPDGQDIAVKRLAVNSLQGDAEFKNEVLLVAKLQHRNLVTLLGFCLERKERLLVYEFVPNGSLDHFILDPAKRRTLTWENRYEIISGIARGLLYLHQDSQLKIIHRDLKASNVLLDAALRPKISDFGMAKLFAQEQTHDKTSKIAGTYGYMAPEYALGGKFSAKSDVYSFGVMVLEIVTGLSQQRLINQNGETTEHLLSYAWRNWKEGEVTNLVDPVMEACLTNEMMRCIHIGLLCVQENSTNRPTMDSVVLMLSSDSLRLVIPSQPAFLLHSNVEPNRSSVRLVRQVDVEVSANEASITDLYPR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4145649 4148742 + Bma025104.1 Bma07g00324 85461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00324 662 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Bma07g00324 662 Pfam Salt stress response/antifungal 151 241 IPR002902 -
Bma07g00324 662 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Bma07g00324 662 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 634 - -
Bma07g00324 662 SUPERFAMILY Protein kinase-like (PK-like) 326 631 IPR011009 -
Bma07g00324 662 Gene3D Transferase(Phosphotransferase) domain 1 415 618 - -
Bma07g00324 662 MobiDBLite consensus disorder prediction 246 276 - -
Bma07g00324 662 SMART serkin_6 339 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00324 662 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Bma07g00324 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Bma07g00324 662 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 634 - -
Bma07g00324 662 ProSiteProfiles Protein kinase domain profile. 339 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00324 662 CDD STKc_IRAK 345 611 - -
Bma07g00324 662 MobiDBLite consensus disorder prediction 250 266 - -
Bma07g00324 662 Gene3D Phosphorylase Kinase; domain 1 301 414 - -
Bma07g00324 662 Gene3D - 27 132 IPR038408 -
Bma07g00324 662 Gene3D - 141 244 IPR038408 -
Bma07g00324 662 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Bma07g00324 662 Pfam Protein tyrosine and serine/threonine kinase 342 583 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01224 Bma-Chr4:35257622 Bma07g00324 Bma-Chr7:4145649 4.63E-41 dispersed
Bma07g00324 Bma-Chr7:4145649 Bma11g00352 Bma-Chr11:3756533 0 dispersed
Bma07g00324 Bma-Chr7:4145649 Bma07g00326 Bma-Chr7:4240191 1.74E-177 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66592 PF07714 PK_Tyr_Ser-Thr 4.80E-48 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00324 - - qsu:112006901 696.427