Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00326 ATGGATTTCTTCAAATTACCTTCAGCTCTCGTCTTCTTCTCTTTTCTGCTCTTTTTTCTTTGCATCCCCATGAATGAAGCAGCTCCTGAACTAAGATCTACTTATTGTCCGGCAACATCCAACTTCACAACCAACAGCACCTACCAGTCAAACCTCAATCTCCTCCTCTCTTCTCTCACTTCCAACGCTACCCTCGAAAGCGGCTTCTTCAACGCCACCACCGGCGATGTCGAAATCATCTACGGCATCTTTCTCTGCCGCGCTGATGTTCCTCCGGCAGCTTGTCAAGAATGCTCTGCCACCGCAGCGCAAGAATTACAGCGAAGTTGCCCAACCGGGAAAGTAGCTACAATCTGGTACGACGCGTGCATGGTTCGGTATTCCAATGAGGCCATCTTCTCCACTCTCACAGAGTCGCCGAGGATCCAATTGTTAAGCTCAGCGAACGTCACTGACCCTGTCCGGTTCAACCAGTTTGTGAGTGATATTTTGAATAGATTATCAACAGAAGCGGCAAACACTCCTACGGTAAAGAAGTTTGCGACCACTGAACAAAATTTTACGAGCACGCAGATCTTGTACAGCTTTGTCCAGTGTACGCCGGATCTCACCATTTCCGCCTGCGACAGCTGTATCCGTAGAGCCATTACCGTTCTTCCGACGTATCCAATTGGCGGAAATGTTCTGAGTCCGAGCTGTAATATTAGATATGAATTCTATCCATTCTACAACGTTACATCGGCAAGAGAACAAAGTCAGCCTCCACCTCCACCGCCATCGCCAGGAAAAAAGAAAATTTCAGCGGTTACAATTATCGCCATTGTCGTCCCAGTCTTGGTCTCTTTAGTGTTTCTCTCCATCTGCTTCTGCTTACTGAGAAGAAGGAGAGCCAAAGCCAGAGCATACAAGTCTGTTATGGAAGATAATGTTGGAGATGAAATGTCAACCAACGAGTCGTTGCAATTCGATTTCGCAACCATTGAAGCTGCCACCAACAAATTTTCTGACAATAACAAGATTGGAGAAGGCGGATTCGGGCCTGTTTATAAAGGTGTTCTTCCTAACAGGGAAGAAATAGCAGTAAAGAGACTATCAGGAAGTTCCACTCAAGGCGAAGTGGAGTTCAAGAATGAGGTTGTCCTCGTGGCCAAGCTTCAACACCGGAATCTGGTGAGACTCCTTGGATTTTGCTTGGAACGAAACGAAAGAATCCTCGTCTATGAATACATCCCCAACAAAAGCCTCGACTACTTTCTATTTGATTCTGAAAAGAAAAGAGAATTGGATTGGACCCAGCGATATAAGATCATAGTTGGTATAGCTCGAGGAATTCTATATCTTCACGAAGACTCGAGACTCACGATCATTCATCGAGATCTCAAAACCAGCAATGTGTTGTTAGACGCCAACATGAACCCAAAGATTTCAGACTTTGGAATGGCAAGGATCTTCGTGGTTGATCAAACGCAGGCCAACACAAATCGAGTAGTTGGAACATATGGTTATATGTCGCCGGAATATGCAATGCAAGGCCACTTTTCAGTGAAGTCGGATATGTTCAGCTTTGGAGTTTTGGTTCTGGAAATCCTTACAGGGAAGAAGAACAGTTCTTTCTATCAATCAGGCAACGCAGAGGACCTCTTGAGCTACGCTTGGAAGCATTGGAGGGATGGAACGGCATTGGATATATTGGATGAAACGTTGAAGGATTCAGGTTACGCGAGAGAAGAAGTGATGAGGTGCATTCAAATGGGTTTGCTGTGCGTTCAGGAAGATCCAGTGGATAGACCAACAATGGCTGCCGTAGTTCTGATGCTTAGCAGTTACTCTATGACTGTCTCTTCGCCTCAGCAGCCTGCGTTTTTTGTTAACAGCCGAACCCAGGATAAAGTGACGGAAAGGGAGCCACAGTCTGATTCGTCGGCAAGCAAGTTGGTTCCGTTGTCGAATAATGAAGCCTCAATCACTGAGATACTTCCTCGATAG 1986 45.87 MDFFKLPSALVFFSFLLFFLCIPMNEAAPELRSTYCPATSNFTTNSTYQSNLNLLLSSLTSNATLESGFFNATTGDVEIIYGIFLCRADVPPAACQECSATAAQELQRSCPTGKVATIWYDACMVRYSNEAIFSTLTESPRIQLLSSANVTDPVRFNQFVSDILNRLSTEAANTPTVKKFATTEQNFTSTQILYSFVQCTPDLTISACDSCIRRAITVLPTYPIGGNVLSPSCNIRYEFYPFYNVTSAREQSQPPPPPPSPGKKKISAVTIIAIVVPVLVSLVFLSICFCLLRRRRAKARAYKSVMEDNVGDEMSTNESLQFDFATIEAATNKFSDNNKIGEGGFGPVYKGVLPNREEIAVKRLSGSSTQGEVEFKNEVVLVAKLQHRNLVRLLGFCLERNERILVYEYIPNKSLDYFLFDSEKKRELDWTQRYKIIVGIARGILYLHEDSRLTIIHRDLKTSNVLLDANMNPKISDFGMARIFVVDQTQANTNRVVGTYGYMSPEYAMQGHFSVKSDMFSFGVLVLEILTGKKNSSFYQSGNAEDLLSYAWKHWRDGTALDILDETLKDSGYAREEVMRCIQMGLLCVQEDPVDRPTMAAVVLMLSSYSMTVSSPQQPAFFVNSRTQDKVTEREPQSDSSASKLVPLSNNEASITEILPR 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4240191 4242864 + Bma025106.1 Bma07g00326 85463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00326 661 SMART serkin_6 334 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00326 661 SUPERFAMILY Protein kinase-like (PK-like) 314 606 IPR011009 -
Bma07g00326 661 ProSiteProfiles Protein kinase domain profile. 334 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00326 661 Pfam Protein tyrosine and serine/threonine kinase 337 604 IPR001245 GO:0004672|GO:0006468
Bma07g00326 661 Gene3D - 29 131 IPR038408 -
Bma07g00326 661 Gene3D - 140 242 IPR038408 -
Bma07g00326 661 MobiDBLite consensus disorder prediction 638 661 - -
Bma07g00326 661 ProSiteProfiles Gnk2-homologous domain profile. 30 132 IPR002902 -
Bma07g00326 661 MobiDBLite consensus disorder prediction 626 661 - -
Bma07g00326 661 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 34 659 - -
Bma07g00326 661 CDD STKc_IRAK 340 606 - -
Bma07g00326 661 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Bma07g00326 661 Pfam Salt stress response/antifungal 149 239 IPR002902 -
Bma07g00326 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Bma07g00326 661 PANTHER PROTEIN, PUTATIVE ISOFORM 1-RELATED 34 659 - -
Bma07g00326 661 ProSiteProfiles Gnk2-homologous domain profile. 138 242 IPR002902 -
Bma07g00326 661 Gene3D Phosphorylase Kinase; domain 1 295 409 - -
Bma07g00326 661 Gene3D Transferase(Phosphotransferase) domain 1 410 625 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00320 Bma-Chr7:3862097 Bma07g00326 Bma-Chr7:4240191 0 dispersed
Bma07g00322 Bma-Chr7:4081161 Bma07g00326 Bma-Chr7:4240191 1.24E-85 dispersed
Bma07g00326 Bma-Chr7:4240191 Bma11g00351 Bma-Chr11:3753381 0 dispersed
Bma14g01896 Bma-Chr14:40558616 Bma07g00326 Bma-Chr7:4240191 3.16E-114 dispersed
Bma15g00789 Bma-Chr15:16806892 Bma07g00326 Bma-Chr7:4240191 2.42E-130 dispersed
Bma07g00324 Bma-Chr7:4145649 Bma07g00326 Bma-Chr7:4240191 1.74E-177 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66593 PF07714 PK_Tyr_Ser-Thr 3.70E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00326 - - cit:102622618 732.25