Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00334 ATGGCAGAGGACTTTCAGGCCAGGATTGGCGCAAGTAACTCGTGGAATTTATCCAAATCTGCGTTTACCGGCGGTTCTCCGCCGTGTTTAACAGGATATAGCGATATCGGTGACTATGGGTGGTCGGGTACTGATATGGTGGGTGTTAAAGGGATGTTTTATGAAGAGCCTAATTTGGTTTCTGGCATCTCCTTTGATTTCCCAAGTGCTCAAAAAGCTCAGATACTGGATTCAGCTTCTGGAGGTGGGAGTATATTGATTGATTCTGATTGCTCGACGATGGGTTTCAGTCTTTCTTCTTCACCAACTTCAGATTGGAATCAAATTTTACTTCGTGGAAACGGAAGAACTGAGAGCTCTCTGAAATCGTTGTTTCTAGGAGACATGGCTACGAACGTGAATTATCAACAAGAAGAACCGATCAGAATCGACCACCATCGATCTTCAAGAATCCGAAAAGATTGGAGCCCTAACGATTTCTCGACCATCGTTGAAGATGATAACTCCATAGCCAACAATACCTTCAAGTCCGCTGATCAAGATTTTTATACTGCCGAACGGTGCCTGAACTCCGATATTTGCTCCGGCAACGACCATAATTTTTCTGCCGGCTATCCCATTGGATCGGCTTCGTACGGGCAGGCTTCGACGTTATTGCAAAATTTATTAAATGCTCAAACACAGCAATCGTCTTTTCTAGCCAATAACAGGTCCAGTAACTCTTCATCTTCCGCTGATTTTGGATTGAATTGTGACGAATCATCATCAGCTTGGCCTAAAGTTGCTTCCAGCTACCAAAAAACATCAAAATCGCAGCACCAAAATGTCGGCTTGTGCTTCCCGAAGAACACACCCTTCTGGAATTCTTCATCTTCAGCAGCGAAGGACAGTAGGGCCGTTCTTTCTCCGTCCTCACAGTCTCAACTCATGGCCTCCTCACTTGCTGAGAAACCCAAGTGCCATAACCTCACAACAAAGCTTTATGCTGGTGAAGATGTTCAACAGTCAGGATTAATCGCGAATAGATTGAATGGAGGAGGAGGAGACTTGGCATTCAAAAGACCTCGGATCGAAACGCCTTCTCCACTTCCAACTTTTAAGGTAAGGAAGGAGAAGCTAGGGGACCGAATAACTGCCCTTCAACAACTGGTTTCGCCTTTCGGAAAGACCGACACTGCATCAGTGCTGCATGAAGCTATTGATTATATCAAGTTTCTCCATGAACAAGTCAGTGTTTTGAGCACTCCGTACATGAAAAGTGGAGCTTCCGATCACCATCAAAAGGAGCCAGAAGAGGCAACACAAGAGCTGAGGAATCGAGGACTTTGTTTGGTACCGATTTCGAGCACATTTGCTGCAGCCAGTGAGACCACGCCTGAGTTATGGACGCCGACGTTCGGAGCAACTTTCAATTAA 1416 45.48 MAEDFQARIGASNSWNLSKSAFTGGSPPCLTGYSDIGDYGWSGTDMVGVKGMFYEEPNLVSGISFDFPSAQKAQILDSASGGGSILIDSDCSTMGFSLSSSPTSDWNQILLRGNGRTESSLKSLFLGDMATNVNYQQEEPIRIDHHRSSRIRKDWSPNDFSTIVEDDNSIANNTFKSADQDFYTAERCLNSDICSGNDHNFSAGYPIGSASYGQASTLLQNLLNAQTQQSSFLANNRSSNSSSSADFGLNCDESSSAWPKVASSYQKTSKSQHQNVGLCFPKNTPFWNSSSSAAKDSRAVLSPSSQSQLMASSLAEKPKCHNLTTKLYAGEDVQQSGLIANRLNGGGGDLAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHEQVSVLSTPYMKSGASDHHQKEPEEATQELRNRGLCLVPISSTFAAASETTPELWTPTFGATFN 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4311921 4313977 + Bma025114.1 Bma07g00334 85471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00334 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 357 406 IPR011598 GO:0046983
Bma07g00334 471 CDD bHLH_AtbHLH_like 363 414 IPR045239 -
Bma07g00334 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 367 419 IPR036638 GO:0046983
Bma07g00334 471 Gene3D - 367 428 IPR036638 GO:0046983
Bma07g00334 471 PANTHER TRANSCRIPTION FACTOR BHLH114 95 456 - -
Bma07g00334 471 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 95 456 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00334 Bma-Chr7:4311921 Bma10g00524 Bma-Chr10:6086778 7.71E-85 dispersed
Bma11g00357 Bma-Chr11:3860039 Bma07g00334 Bma-Chr7:4311921 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00334 - - vvi:100264251 410.994