Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00378 ATGGAAGAAGACGCCAATTCTTGGTTAAGAAGAACGAAATTTTCTCACACAGTTTGTCATCGATTGGATTCGTTGAAATATACTTCAGTTCCTATCACTTTTGAGCCCAATTGGAATTTGGAGTTTAGATCAAGACCTCAAATTCCAACCTCCGATCACAATTTGGCTACCTGTAGTTCTCAAATTTATCAGAAACCAAAGCAGAGGTCTTTGTCTCCGCCTCCCAAGAACATACTCTCCCACGAATTTAAGGAAGCGCAGTCTGATCGGAAGCGGTTTTCATCTCCATGTTCTCGCCGAAGAGAACCTGAGACGCTGAAAATTGAAAATACCAAATCATCCGAATTGAGGTCACTTTCGAGTGCAAACCTTTTGAAGCATTTTGTTTCAAATAAAGGGCAGGAAAAATCCAAACCGAGAAAGGAATCTGGGTGGACTAAGTATTTTGATTATGGTGGAGGTAGGGTAACTGCTGTGGAAGCAGCTGACGAGTATAGTGTTGATCTGTCCAAGCTGTTTCTCGGTCTAAGGTTCGCCCATGGAGCTCACAGCCGTCTCTACCATGGAGTCTACAACGACGAAGCAGTCGCTGTAAAGATTATCAGAGTTCCAGATGATGATGAAAATGGAGTTCTAGGAGCTCGACTGGAGAAGCAATATATCAGAGAAGTCTCTCTACTCTCCCGTCTCCACCATCCAAATGTGATAAAGTTTACAGCAGCCTGTAGAGAGCCGCCAGTCTATTGTATCATCATGGAATATCTTCAAGAGGGATCACTAAGGGCGTATTTGCACAAACAAGAGAGAAAACCTCTTCCTTTACGAAAACTTATCGAATTTGCATTGGATATTTCTCGAGGGATGGAGTTCATTCACTCCAAAGGGGTCATTCATCGGGATCTCAAGCCCGAGAATGTTCTCATCGATCAAGAATTCCACCTAAAAGTTGCCGATTTTGGTATAGCTTGTGAAGAGGCGTATTGTGATGCTCTGGCTGACGATCCGGGGACTTATCGGTGGATGGCTCCTGAGATGATCAAACACAAATCTTACGGCCGGAAAGTTGATGTCTACAGTTTTGGTCTCATCTTGTGGGAAATGGTCGCTGGAGCTATTCCCTACGAGGACATGACCCCAATCCAAGCCGCCTTTGCCGTAGTGAATAAGAATCTTAGACCGGTAATTCCGGACGGCTGCCCACACCCAATGAGAGCGCTGATCGAACACTGTTGGTCGGTGGAGCCGGAAAAGAGGCCGGAGTTTTGGCAAGTGGTTAAGGAAATGTATACCATCGGACACGGGATCGAAACGGCGAGGGTGCTGATGGGATCCTCGCCGCACGATCAGCTCCTGATTCGGACCTCCGATTCGTTTTCCGGGTTGCTCCTTTTCGCGATCGGATTCCTCCTCTTCATGGTCTCCTTCGTGAGGGAGAGAGAGATGCAGACGTTCTTCGCCCAAGGCTGTACTTGTCTCCACTTCTTCATGGCTGTCTGGAGATTTTACTTTGAGAGGAGGGTTGAGGCTCTGGCCTGGGATTGCCTGAGGCAGACAGTTGGCGACGTTCTATTGGCTCTCTCTTGGGTCTTCTTCCTCCTCTGCTCGTGGGGAGAGATGTACGATTAA 1626 47.05 MEEDANSWLRRTKFSHTVCHRLDSLKYTSVPITFEPNWNLEFRSRPQIPTSDHNLATCSSQIYQKPKQRSLSPPPKNILSHEFKEAQSDRKRFSSPCSRRREPETLKIENTKSSELRSLSSANLLKHFVSNKGQEKSKPRKESGWTKYFDYGGGRVTAVEAADEYSVDLSKLFLGLRFAHGAHSRLYHGVYNDEAVAVKIIRVPDDDENGVLGARLEKQYIREVSLLSRLHHPNVIKFTAACREPPVYCIIMEYLQEGSLRAYLHKQERKPLPLRKLIEFALDISRGMEFIHSKGVIHRDLKPENVLIDQEFHLKVADFGIACEEAYCDALADDPGTYRWMAPEMIKHKSYGRKVDVYSFGLILWEMVAGAIPYEDMTPIQAAFAVVNKNLRPVIPDGCPHPMRALIEHCWSVEPEKRPEFWQVVKEMYTIGHGIETARVLMGSSPHDQLLIRTSDSFSGLLLFAIGFLLFMVSFVREREMQTFFAQGCTCLHFFMAVWRFYFERRVEALAWDCLRQTVGDVLLALSWVFFLLCSWGEMYD 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4688446 4692459 - Bma025160.1 Bma07g00378 85515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00378 541 SMART serkin_6 172 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00378 541 Pfam Protein tyrosine and serine/threonine kinase 178 427 IPR001245 GO:0004672|GO:0006468
Bma07g00378 541 Gene3D Transferase(Phosphotransferase) domain 1 257 442 - -
Bma07g00378 541 CDD STKc_MAP3K-like 179 428 - -
Bma07g00378 541 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 426 - -
Bma07g00378 541 SUPERFAMILY Protein kinase-like (PK-like) 163 427 IPR011009 -
Bma07g00378 541 PRINTS Tyrosine kinase catalytic domain signature 290 308 IPR001245 GO:0004672|GO:0006468
Bma07g00378 541 PRINTS Tyrosine kinase catalytic domain signature 399 421 IPR001245 GO:0004672|GO:0006468
Bma07g00378 541 PRINTS Tyrosine kinase catalytic domain signature 355 377 IPR001245 GO:0004672|GO:0006468
Bma07g00378 541 PRINTS Tyrosine kinase catalytic domain signature 336 346 IPR001245 GO:0004672|GO:0006468
Bma07g00378 541 PRINTS Tyrosine kinase catalytic domain signature 252 265 IPR001245 GO:0004672|GO:0006468
Bma07g00378 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Bma07g00378 541 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 426 - -
Bma07g00378 541 ProSiteProfiles Protein kinase domain profile. 172 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00378 541 Gene3D Phosphorylase Kinase; domain 1 161 256 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02697 Bma-Chr1:84412530 Bma07g00378 Bma-Chr7:4688446 3.37E-35 dispersed
Bma06g00231 Bma-Chr6:2860740 Bma07g00378 Bma-Chr7:4688446 3.35E-93 dispersed
Bma07g00378 Bma-Chr7:4688446 Bma11g00795 Bma-Chr11:23180689 2.36E-91 dispersed
Bma10g00500 Bma-Chr10:5885914 Bma07g00378 Bma-Chr7:4688446 2.27E-47 dispersed
Bma13g00956 Bma-Chr13:40735395 Bma07g00378 Bma-Chr7:4688446 3.76E-46 dispersed
Bma07g00378 Bma-Chr7:4688446 Bma07g00631 Bma-Chr7:10046470 6.31E-92 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66595 PF07714 PK_Tyr_Ser-Thr 1.70E-61 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00378 - - qsu:112022930 619.387