Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00389 ATGGCGCCCAGGGAGAAGACGGGTGGCGCTAAGGGAAACGGAGGCGTAAAGGAGGTGCATTTCAGAGGCGTCAGGAAGAGACCGTGGGGGAGGTACGCTGCCGAGATCAGAGATCCCGGGAAGAAGAGCCGCGTTTGGCTCGGCACCTTTGATACGGCCGAAGAGGCTGCTCGAGCTTACGATGCCGCCGCTAGAGAATTTAGGGGAGCCAAAGCCAAAACTAACTTTCCCCTTCTCATCGACGATGTTCCCAAATGTACTCCGAATCGGAGTCCTAGCCAGAGTAGTAGCACTGTAGAGTCGTCAAGCCATGAGCCGCCTCTTTCGCTCGGATCTACGCGGCTGGATCTAAACGTCACTAACGATAGAGCTTTGAGGTTCCCGTTCGCACAACGCCTGATTCCGTCGCTTGGTGGAACTGTCGCCGGCGGTGTGCCGGCTGGGAATCAGATTATCTACTTCGACGCAGCTGTTGCAGCTGGGATGGGGAACGTTCATCAGTATCAAAGGCTGAGATTTGATGACCATCGATCGGCGAATGAAATATACTCCGCTGCAAGCGGTGGGATCCAGAGCGACTCCGACTCATCCTCCGTCGTGGATTTGAAGCCCCGGAAGCTCCCCGATCTTGATCTCAACTTCCCTCCTCCAGAAGACGTTAATTTTCCGTAG 672 55.36 MAPREKTGGAKGNGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPLLIDDVPKCTPNRSPSQSSSTVESSSHEPPLSLGSTRLDLNVTNDRALRFPFAQRLIPSLGGTVAGGVPAGNQIIYFDAAVAAGMGNVHQYQRLRFDDHRSANEIYSAASGGIQSDSDSSSVVDLKPRKLPDLDLNFPPPEDVNFP 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4768949 4769620 - Bma025171.1 Bma07g00389 85526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00389 223 CDD AP2 20 77 IPR001471 GO:0003700|GO:0006355
Bma07g00389 223 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 4-LIKE 1 203 - -
Bma07g00389 223 MobiDBLite consensus disorder prediction 185 223 - -
Bma07g00389 223 MobiDBLite consensus disorder prediction 83 113 - -
Bma07g00389 223 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Bma07g00389 223 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Bma07g00389 223 MobiDBLite consensus disorder prediction 87 113 - -
Bma07g00389 223 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Bma07g00389 223 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Bma07g00389 223 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Bma07g00389 223 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Bma07g00389 223 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Bma07g00389 223 MobiDBLite consensus disorder prediction 1 21 - -
Bma07g00389 223 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 203 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00559 Bma07g00389 CCT
Bma07g00389 Bma14g01008 CCT
Bma01g00559 Bma07g00389 ECH
Bma07g00389 Bma14g01008 ECH
Bma07g00389 Bma11g00414 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00389 Bma-Chr7:4768949 Bma08g00565 Bma-Chr8:33833522 2.12E-49 dispersed
Bma01g00559 Bma-Chr1:4901716 Bma07g00389 Bma-Chr7:4768949 3.13E-31 wgd
Bma11g00414 Bma-Chr11:4454815 Bma07g00389 Bma-Chr7:4768949 1.19E-79 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57600 PF00847 AP2 3.20E-15 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00389 K09286 - jre:108983254 216.468