Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00406 ATGGGTCTTGCAGTGTTTCTCACACCATCCATGTTCCTCCTGTTCTTCTTCCTCCTTTTCCTATCGCCCGCCATTGTTGTCTCTCTGAACCAAGAAGGTCTCTATTTGCGCAGCGTCAAGATGTCTCTGGATGATACAGACTCTGTTCTCTCTTCCTGGGACAACGGAGACGACACCCCTTGCTCTTGGTTTGGTGTCACCTGCGAACCTGTTGGCCGGACTGTTGTCTCCGTCGATCTTTCTGCCTCCAATCTCGCTGGCCCTTTTCCCTCCCTCCTCTGTCGCCTCCGTAACCTTTCCTTTCTTTCGCTTTACAACAACTCTATAAACTCCACCTTCCCCTCCGATCTCTCGGAGTGTCAGAACCTCCAGCACCTCAACGTCGCTCAGAATCTCCTTACTGGTACGCTTCCAGATTCCCTTTCTGATCTTCCTAACCTCCGCTATTTAGACTTCACTGGGAACAATTTTTCCGGCGGCATACCGCTCAGTTACGCTCGATTTCAGAAGCTTGAAGTTCTTTCTCTCGTTTACAATCTTCTCGACGGTGCCCTGCCTTCATTTCTCGGCAACATAACTACTCTCAAAATGCTTAATCTCTCGTACAATCCATTTATTCCTGGTCCGATTCCGGCGGAGTTTGGAAACCTAACAAATTTGGAGGTGCTATGGTTGACGCAATGTAACTTGGTCGGCGAGATTCCTGACTCACTGGGTAGACTCAAGCGACTCACAGATTTGGACTTGGCTCTTAACAACCTTCACGGTTCTATTCCGACATCTCTCACCGAGTTAACCAGTGTGGTTCAGATTGAGTTGTATAATAACTCCCTTTCCGGCCCGTTACCTCCTAGCTTTTCGAGTCTCACTGCTCTGAGATTATTCGATGCCTCAATGAACGAGTTAACTGGATCGATTCCAGACGAGTTGTGTCGGTTACCGCTCGAAAGTCTAAACCTTTACGAGAACTATTTTGAGGGGAAGCTGCCGGAAAGCATTTCGGAATCGACCGTACTGTACGAACTCAGGTTGTTCGGGAACCGACTCACAGGTGAGTTGCCGAAAAATCTTGGGAAAAATTCGCCTTTAAGATGGATAGATATATCGGACAACATGTTTTCAGGGGAGCTTCCGCCGAATCTCTGCGGGAAGGGTGAGTTAGAAGAGCTTTTGATAATTAACAACCAGTTCACCGGCGAGATCCCGGTGAGTCTGGGCGAGTGCCGGAGCTTGACCCGGGTCAGACTCGGCCACAATAGATTATCTGGTGAAATTCCGATCGGTTTTTGGGGACTTCCCCATGTGTATCTACTCGAGCTCATACACAATTCTTTTTCTGGCCCCATCGCAAAAACTATTGCCAGCGCCGGCAACCTCTCTATGCTTATTATTTCTAACAATAGCTTTGGGGGAACCATACCGGAGGAAATTGGTTGGCTGGAAAACCTGGTAGAGTTTTCTGGTGGCCATAACAAGTTCAACGGAGCCTTGCCAAACAGTATTGTGAATCTTGCTCAGCTTAGTAAGTTGGATCTTAGCAGTAACAATCTTTCCGGCAATCTTCCAGGCGGGATTAAGTCCTGGAAAAGCCTAAACGAGCTACAATTGTCAAATAACAAGCTCTCTGGAGAAGTTCCTGAAGAAATTGGCAGCTTGCCTGTGCTTAATTACCTCGATTTATCATCTAATCGGTTTTCCGGAGAAATCCCTTTGACCTTGCAGAATCTTAAGCTCGGCCTCCTCAATTTGTCAGTCAATTGTCTCTCCGGCGACCTTCCGCCATTGTTTTCCAAACAAATGTACAGAAGTAGCTTCCTGGGTAATCCCGAATTGTGTGGAGATTTGGAGGGTCTGTGTGACAGCAATAGCGAAGCAAAAGGACGGGGCTACATTTGGCTGCTTCGCTCGATTTTCACTCTTGCCGGCATAGTTTTGATTGTCGGAGTAGCTTGGTTTTACTTCAAGTACAAGAAATTCAAAAAGTCAAAAAAATCGATCGACAAGTCAAAATGGACTCTAATGTCGTTCCACAAACTGGAATTCAGTGAATTTGAGATCTTAGATTCTCTGGACGAAGACAGTGTAATAGGCAGTGGATCATCCGGGAAGGTCTACAAGGTTATGATCAGCAATGGCGAAGCTGTTGCCGTCAAGAAAATTTGGGGAAGGGCCAAAATGGACTGCCCAAGTGACGATATCGAAAGGGGTGGAGTTCGAAACGACTGCTTTGAAGCAGAAGTCGAGACACTCGGGAAGATTCGACACAAAAACATTGTAAAACTCTGGTGTTGTTGCACCACAAAAGACTGCAAGCTATTGGTCTATGAGTATATGCCTAATGGAAGCTTGGGAGATTTACTTCACAGCAGCAAAGGAGGCCTTCTAGACTGGCCAACCCGATATAAAATCGCCTTCGACGCAGCTGAGGGGCTTTCTTATTTGCATCACGACTGTCTTCCTCCAATCGTCCATCGAGATATCAAGGCCAATAATATTTTGTTAGATGCAGAGTTCGGTGCGAAAGTAGCCGATTTTGGGGTTGCCAAGGCAGTGGATTCGTCCGGTAAAGCCCCAAAATCCATGTCAGTCATTGCAGGTTCTTGTGGTTACATTGCCCCTGAATATGCATATACGCTGCGAGTGAATGAAAAGAGCGATATATACAGTTTCGGAGTTGTAATTCTCGAATTAGTAACCGGCCGGCAGCCGGTGGAGCCGGAATTTGGGGAGAATGATTTGGTGAATTGGTTATGCACGACATTGGATCAAAAGGGAGTCGACGAAGTTATTGACAAGAAACTCGATTCTTGTTTCAAAGAAGAAATTATCAAAGTTCTCAACATAGCTCTTCTCTGCACGAGCCCACTCCCGATCAACCGGCCGTCCATGAGAAGGGTGGTCAAGTTATTGCAGGAAGTCGCCGGAGAAAGCCAGCCGAAAGTTGCTAAGAAAGACGGAAAGCTCTCTCCTTATTACCACGAAGACACCTCCGATCAGGGAAGTACAGCTTAA 3012 46.81 MGLAVFLTPSMFLLFFFLLFLSPAIVVSLNQEGLYLRSVKMSLDDTDSVLSSWDNGDDTPCSWFGVTCEPVGRTVVSVDLSASNLAGPFPSLLCRLRNLSFLSLYNNSINSTFPSDLSECQNLQHLNVAQNLLTGTLPDSLSDLPNLRYLDFTGNNFSGGIPLSYARFQKLEVLSLVYNLLDGALPSFLGNITTLKMLNLSYNPFIPGPIPAEFGNLTNLEVLWLTQCNLVGEIPDSLGRLKRLTDLDLALNNLHGSIPTSLTELTSVVQIELYNNSLSGPLPPSFSSLTALRLFDASMNELTGSIPDELCRLPLESLNLYENYFEGKLPESISESTVLYELRLFGNRLTGELPKNLGKNSPLRWIDISDNMFSGELPPNLCGKGELEELLIINNQFTGEIPVSLGECRSLTRVRLGHNRLSGEIPIGFWGLPHVYLLELIHNSFSGPIAKTIASAGNLSMLIISNNSFGGTIPEEIGWLENLVEFSGGHNKFNGALPNSIVNLAQLSKLDLSSNNLSGNLPGGIKSWKSLNELQLSNNKLSGEVPEEIGSLPVLNYLDLSSNRFSGEIPLTLQNLKLGLLNLSVNCLSGDLPPLFSKQMYRSSFLGNPELCGDLEGLCDSNSEAKGRGYIWLLRSIFTLAGIVLIVGVAWFYFKYKKFKKSKKSIDKSKWTLMSFHKLEFSEFEILDSLDEDSVIGSGSSGKVYKVMISNGEAVAVKKIWGRAKMDCPSDDIERGGVRNDCFEAEVETLGKIRHKNIVKLWCCCTTKDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAFDAAEGLSYLHHDCLPPIVHRDIKANNILLDAEFGAKVADFGVAKAVDSSGKAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRQPVEPEFGENDLVNWLCTTLDQKGVDEVIDKKLDSCFKEEIIKVLNIALLCTSPLPINRPSMRRVVKLLQEVAGESQPKVAKKDGKLSPYYHEDTSDQGSTA 1003
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4940273 4943391 - Bma025192.1 Bma07g00406 85543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00406 1003 SMART LRR_typ_2 504 527 IPR003591 -
Bma07g00406 1003 SMART LRR_typ_2 96 120 IPR003591 -
Bma07g00406 1003 SMART LRR_typ_2 217 241 IPR003591 -
Bma07g00406 1003 SMART LRR_typ_2 289 313 IPR003591 -
Bma07g00406 1003 SMART LRR_typ_2 552 575 IPR003591 -
Bma07g00406 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Bma07g00406 1003 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 14 981 - -
Bma07g00406 1003 SUPERFAMILY Protein kinase-like (PK-like) 674 970 IPR011009 -
Bma07g00406 1003 MobiDBLite consensus disorder prediction 977 1003 - -
Bma07g00406 1003 Gene3D Ribonuclease Inhibitor 28 205 IPR032675 -
Bma07g00406 1003 Gene3D Ribonuclease Inhibitor 315 622 IPR032675 -
Bma07g00406 1003 Pfam Protein kinase domain 692 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00406 1003 Pfam Leucine rich repeat 97 157 IPR001611 GO:0005515
Bma07g00406 1003 ProSitePatterns Protein kinases ATP-binding region signature. 696 719 IPR017441 GO:0005524
Bma07g00406 1003 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 981 - -
Bma07g00406 1003 SUPERFAMILY RNI-like 77 383 - -
Bma07g00406 1003 SUPERFAMILY RNI-like 272 596 - -
Bma07g00406 1003 Gene3D Transferase(Phosphotransferase) domain 1 778 996 - -
Bma07g00406 1003 Gene3D Ribonuclease Inhibitor 206 314 IPR032675 -
Bma07g00406 1003 MobiDBLite consensus disorder prediction 978 992 - -
Bma07g00406 1003 SMART serkin_6 690 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00406 1003 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Bma07g00406 1003 ProSiteProfiles Protein kinase domain profile. 690 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00406 1003 Gene3D Phosphorylase Kinase; domain 1 672 777 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00209 Bma-Chr1:1865398 Bma07g00406 Bma-Chr7:4940273 2.77E-15 dispersed
Bma07g00406 Bma-Chr7:4940273 Bma10g00709 Bma-Chr10:10776543 0 dispersed
Bma07g00406 Bma-Chr7:4940273 Bma15g01096 Bma-Chr15:43629790 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66596 PF00069 Pkinase 6.90E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00406 - - jre:108979816 1469.91