Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00461 ATGAGTCTTTACGATTTTGACGCCTCTTCTGGTGGTAGTAGCGGCAGTTTTTCCTCCTCCGCTACTAAGACCCACGAAATCGATTGTCTTCTCGCCGGAGCTGGCTATAAAGTCCGCCGCTCCGACCTACAGCATGTGGCTCAGCGCCTCGAGCGGCTCGAAACCGCCATGGTTAACTCTCCCGCCGAGATCTCCCAGCTGGCCTCCGATGCTGTCCACTACAATCCCTCCGATGTTGTTTCTTGGGTGGATTCCATTCTCTCCGAGTTGCATCAGACAGTTGAACTTCCCGATTTCTCTGATCTCGTGGCGCCTCCACCGCTTGATCAGACGGCCGAGCGTAGTCCTTGTTCGGACATCAGTTACGCTCTGCCCCACCAGAATATTGTTCAGAATCCTATCGTCGTTAGCGCTATGGAAGAAGATTCCGGCATAAAACTGGTGCACACATTGCTAACCTGCGCCGAGTCCGTTGAACGTGGCGACCTGACAATGGCTGGCTCTTTGATCATGGATATGCAGGCTCTTCTGATACGCGTCAACACCGATTGCGGCATCGGTAAGGTCGCCGGCTGCTTCATCGACGCGCTGAGTCGCCGGATTTTCGCATCTCCCGGCATGGTCCCCAGCGTCTCGGCCTATGAAAACGAGGTTCTGTATCGTCATTTTTACGAAGCTTGCCCCTACTTAAAATTCGCTCATTTTACAGCAAATCAAGCAATATTGGAAGCCTTTGACGGTCACGATTGCGTCCACGTCATCGACTTTAACTTAATGCACGGCCTACAATGGCCGGCTCTTATACAAGCGTTAGCACTCCGCCCTGGTGGACCTCCTCTCCTCCGTTTAACAGGTATTGGCCCGCCATCGCCTGACGGCCGAGATTCACTCCGAGAAATTGGTTTACGGCTAGCCGAGCTCGCCCGTGCTGTCAACGTCCGGTTTGCTTTCCGTGGCGTTGCCGCTTCGCGGCTCGACGACGTCATGCCATGGATGCTCCAAGTGAGCTCAAAAGAGGCCGTTGCCGTCAACTCAATCATGCAGCTCCACCGGCTTCTAGGACCCGAACCGACCCAAAACTCTCCAATCCAGACGGTTCTCGGGTGGACCCGGAAACTAAACCCTAAAATCATGACCGTCGTCGAGCAAGAATCCGATCACAACCAAACCGGATTCTTGAACCGGTTCACCGAAGCTCTGTACTACTACTCCACCATGTTCGACTCGCTCCAAGCTTGTTCCCTACAGCCAGAGAAGGCCTTAGCCGAGATGTACATACAGAAAGAGATTCGGCTGGGTCGAACAGGGTTCAAACATTTCCCTCTGGGCTCCAACGCATTCATGCAAGCCAGCATGCTATTGAGTCTGTTCTCGGCGGAAGGTTACTGCGTAGAGGAGAAGGACGGTTGTTTGACCCTTGGGTGGCATAGTCGATCTCTCATTTCAGCTTCGGCTTGGCAAGCAGAGCCAGAGTCCTCCCCTCCACTTGGCACAGTTAATCAAGTATTATATGAATAA 1518 53.29 MSLYDFDASSGGSSGSFSSSATKTHEIDCLLAGAGYKVRRSDLQHVAQRLERLETAMVNSPAEISQLASDAVHYNPSDVVSWVDSILSELHQTVELPDFSDLVAPPPLDQTAERSPCSDISYALPHQNIVQNPIVVSAMEEDSGIKLVHTLLTCAESVERGDLTMAGSLIMDMQALLIRVNTDCGIGKVAGCFIDALSRRIFASPGMVPSVSAYENEVLYRHFYEACPYLKFAHFTANQAILEAFDGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARAVNVRFAFRGVAASRLDDVMPWMLQVSSKEAVAVNSIMQLHRLLGPEPTQNSPIQTVLGWTRKLNPKIMTVVEQESDHNQTGFLNRFTEALYYYSTMFDSLQACSLQPEKALAEMYIQKEIRLGRTGFKHFPLGSNAFMQASMLLSLFSAEGYCVEEKDGCLTLGWHSRSLISASAWQAEPESSPPLGTVNQVLYE 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5575831 5577419 + Bma025249.1 Bma07g00461 85598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00461 505 Pfam GRAS domain family 147 431 IPR005202 -
Bma07g00461 505 PANTHER OS05G0574900 PROTEIN 431 491 - -
Bma07g00461 505 PANTHER OS05G0574900 PROTEIN 17 430 - -
Bma07g00461 505 MobiDBLite consensus disorder prediction 1 20 - -
Bma07g00461 505 Gene3D - 26 90 IPR038088 -
Bma07g00461 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 431 491 IPR005202 -
Bma07g00461 505 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 430 IPR005202 -
Bma07g00461 505 Pfam Transcriptional regulator DELLA protein N terminal 28 93 IPR021914 -
Bma07g00461 505 ProSiteProfiles GRAS family profile. 138 487 IPR005202 -
Bma07g00461 505 SMART DELLA_2 28 100 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g01086 Bma07g00461 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01086 Bma-Chr6:47704024 Bma07g00461 Bma-Chr7:5575831 9.66E-127 dispersed
Bma07g00461 Bma-Chr7:5575831 Bma14g01407 Bma-Chr14:26610798 3.82E-80 dispersed
Bma07g00461 Bma-Chr7:5575831 Bma01g01147 Bma-Chr1:12442892 9.44E-129 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57608 PF03514 GRAS 1.40E-88 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00461 K14494 - jre:109006296 701.819