Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00473 ATGATGGAATCTCTCATTTTTAGATCGTTTTTCCTCGTCTCTCTATGTTTCAAACTCTGTGTTTATTCCGCTTTTTCCCAGCCGGATTTTGAGCGTCGAAACTGCACAAACGCTGGTTCCTACCCCGACGACGGCCCCTTCAAGAGGAATCTCGACACCGTACTTTCTGCAATTTCTTCCAACACCAACATCGACTATGGTTATTACAATTTCTCCGCTGGAGATGGCCCTTCCAGGGTGAACGCCATCGCTCTTTGTATAGGAGACCTGCCAATCGACGAATGTCGAAGCTGCGTTTATAACGCCACTATCAGGATTACAAAGAGTTGTCCGAACAAAATTGAGGCGGTGGGATTGTACTTGAATTGCATGCTTCGTTATTCAAACAAATCCATAAAGAGCAACGATGATATGCTAGATCTTCACAATCCAGTAAAGGTAGCAGACGTTGATGGATACAATGAAGCAGCTGTAAACTTAACGGAGAGATTGAGAGACACAGCCGCATCTGGCTCTTCTACTCGTAAGCTGGCAACTGGAGAAATCGTAGCCCCATCGTCCAAGACTATTTACGGGCTCGTTCAGTGCGCTCCTGACTTATCGAAACTGGAATGCGAGGAATGCTTGAATCGAGCCATACGACATATTCCTTCGTGTTGTAAGGGAAACGACGGCTTACGATTGATTCCGTCTGTTTGTCTTTTGTGGTATGAGAACCACAGGTTCTACAGCGAATCGCCCTCATCATCGCCCTCATCATCGCCCCCATCGTTGTTGTCACCACAGCCTCCGCCAATCGATTCCCCGCCGGATTTTGAGCGTACAAACTGCACAAACGCTGGTTCCTACACCGACGACAGCACCTTCAAGAGGAATCTCGACACTGTACTTTCTGCAATTTCTTCCAACACCAACATCGACTATGGTTATTACAATTTCTCCGCTGGAGATGGCCCTTCCAGAGTGAACGCCATCGCTCTTTGTATAGGAGACCTGCCAATCGACGAATGTCGAAGCTGCGTTTATAACGCCACTATCAGGATTACAAAGAGTTGTCCGAACCAAATTGAGGCGGTGGGATTGTACTTGAATTGCATGCTTCGTTATTCAGACAAATCCATAAAGAGCAACGATGATATGCTAGATCTTCACAATCCAGTAAAGGTAGCAGACGTTGATGGATACAATGAAGCAGCTGTAAACTTAACGGAGAGATTGAGAGACAAAGCTGCATCTGGCTCTTCTACTCGTAAGCTGGAAACTGGAGAAATCGTAGCCCCATCGTCCAAGACCATTTACGGGCTCGTTCAGTGCGCTCCTGACTTATCGAAACTGGAATGCGAGGAATGCTTGAATCGAGCCATACGACATATTCCTTCGTGTTGTAAGGGAAACGACGGCTTACGATTGATTCCGTCTGTTTGTCTTTTGTGGTATGAGAACCACAGGTTCTACAGCGAATCGCTCTCATCATCGCCCCCATCGTTGTTGTCACCACAGCCTCCGCCAATCGGAGAAGTAAGTGACAGAGCTAGAACCATCATTATCGTTGTTGTCACCTCTGTCGCAGGATTGATCCTCATCGTCGCCATTTCCGCTGTCTTAATATCTAGAAAGAGAAAGCATGCAAATTCAACGGAGAGAGGAGAGAGTCTTCCTTTGCGAGAACAAGACGAGGATGGAATATTCACATCTGAGACGCTGCAATTTGAGTTGGCTGTTATTAAGGCAGCAACAGATGATTTTTCTGATGCAAACAAGCTTGGAGAAGGTGGGTTTGGACCCGTTTATAAGGGTAGGCTATCTAATGGAGAAACCATTGCCGTGAAGAGGCTTTCGAGGAACTCGGGGCAAGGAGACCCTGAATTTAAAAATGAAGTCATTTTGGTCGGTAAGCTTCAACACCGGAACTTAGTCAGGCTCTTAGGATTCAGCTTTCGAGGAAATGAGAGGCTTCTTGTTTATGAATTTGTGCCCAATGCAAGCCTTGATCGATTTATATTTGATGCACAAAGACGGACAAATTTAGACTGGGACAGGAGATTCAAAATCATAGGTGGCATTGCTCGAGGACTACTCTATCTTCACGAAGACTCTCGGCTTAGAATTATTCATCGTGATCTCAAAGCCAGCAATATTCTGTTGGATGCAGAAATGAATGCCAAAATAGCAGATTTTGGCTTGGCAAAACTGTTTGAAATGGACGAGACGCAAGGGAACACTAGCAGGGTAGTGGGTACCTATGGTTATATGGCACCAGAGTATGTTCTCCATGGGCAGTTCTCAGTAAAATCTGATGTGTACAGCTTCGGCATAATAATTCTTGAGATAGTTAGTGGGCAAAAGAACAACTGCTTCCGCAACGGAGAAAGAGTGCAAGACCTCTTGAGTTTTGTTTGGAATCGCTGGAGAGAAGGAAGCAGTTCAAACGTAATAGACCCAACACTGACTTCAGGTTCCAAAAATGAAATGATGAGATGCATTCACATCGGGCTGCTGTGCGTTCAAGAAAACCCGGCCCAGAGACCGACAATGGCGTCCGTGGTTCTAATGCTCAACAGCTTCTCTCTCTCCCTCCCCGTCCCAGTCGGGCCTGCATTTTATGCGAGCACCACCATCGTGGAAGCAGAGAACACAGAGCCAGCAGGTTCCAAAAGCAACTCCCTTGGCCATTCAAACGAAGCTTCCATCACCAAGAGTGACCTCAATCCTCGCTAG 2718 46.36 MMESLIFRSFFLVSLCFKLCVYSAFSQPDFERRNCTNAGSYPDDGPFKRNLDTVLSAISSNTNIDYGYYNFSAGDGPSRVNAIALCIGDLPIDECRSCVYNATIRITKSCPNKIEAVGLYLNCMLRYSNKSIKSNDDMLDLHNPVKVADVDGYNEAAVNLTERLRDTAASGSSTRKLATGEIVAPSSKTIYGLVQCAPDLSKLECEECLNRAIRHIPSCCKGNDGLRLIPSVCLLWYENHRFYSESPSSSPSSSPPSLLSPQPPPIDSPPDFERTNCTNAGSYTDDSTFKRNLDTVLSAISSNTNIDYGYYNFSAGDGPSRVNAIALCIGDLPIDECRSCVYNATIRITKSCPNQIEAVGLYLNCMLRYSDKSIKSNDDMLDLHNPVKVADVDGYNEAAVNLTERLRDKAASGSSTRKLETGEIVAPSSKTIYGLVQCAPDLSKLECEECLNRAIRHIPSCCKGNDGLRLIPSVCLLWYENHRFYSESLSSSPPSLLSPQPPPIGEVSDRARTIIIVVVTSVAGLILIVAISAVLISRKRKHANSTERGESLPLREQDEDGIFTSETLQFELAVIKAATDDFSDANKLGEGGFGPVYKGRLSNGETIAVKRLSRNSGQGDPEFKNEVILVGKLQHRNLVRLLGFSFRGNERLLVYEFVPNASLDRFIFDAQRRTNLDWDRRFKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDAEMNAKIADFGLAKLFEMDETQGNTSRVVGTYGYMAPEYVLHGQFSVKSDVYSFGIIILEIVSGQKNNCFRNGERVQDLLSFVWNRWREGSSSNVIDPTLTSGSKNEMMRCIHIGLLCVQENPAQRPTMASVVLMLNSFSLSLPVPVGPAFYASTTIVEAENTEPAGSKSNSLGHSNEASITKSDLNPR 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5727607 5733751 + Bma025265.1 Bma07g00473 85610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00473 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Bma07g00473 905 MobiDBLite consensus disorder prediction 254 270 - -
Bma07g00473 905 CDD STKc_IRAK 588 853 - -
Bma07g00473 905 SUPERFAMILY Protein kinase-like (PK-like) 562 852 IPR011009 -
Bma07g00473 905 ProSiteProfiles Gnk2-homologous domain profile. 377 484 IPR002902 -
Bma07g00473 905 MobiDBLite consensus disorder prediction 246 274 - -
Bma07g00473 905 Gene3D Transferase(Phosphotransferase) domain 1 658 858 - -
Bma07g00473 905 Gene3D Phosphorylase Kinase; domain 1 543 657 - -
Bma07g00473 905 Gene3D - 271 373 IPR038408 -
Bma07g00473 905 Gene3D - 29 131 IPR038408 -
Bma07g00473 905 Gene3D - 138 242 IPR038408 -
Bma07g00473 905 Gene3D - 380 484 IPR038408 -
Bma07g00473 905 Pfam Salt stress response/antifungal 277 371 IPR002902 -
Bma07g00473 905 Pfam Salt stress response/antifungal 151 239 IPR002902 -
Bma07g00473 905 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Bma07g00473 905 Pfam Salt stress response/antifungal 393 481 IPR002902 -
Bma07g00473 905 ProSiteProfiles Protein kinase domain profile. 582 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00473 905 SMART serkin_6 582 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00473 905 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 278 873 - -
Bma07g00473 905 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 15 252 - -
Bma07g00473 905 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Bma07g00473 905 MobiDBLite consensus disorder prediction 879 905 - -
Bma07g00473 905 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 278 873 - -
Bma07g00473 905 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 252 - -
Bma07g00473 905 ProSiteProfiles Gnk2-homologous domain profile. 271 374 IPR002902 -
Bma07g00473 905 ProSiteProfiles Gnk2-homologous domain profile. 135 242 IPR002902 -
Bma07g00473 905 Pfam Protein tyrosine and serine/threonine kinase 586 850 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00963 Bma-Chr5:48086594 Bma07g00473 Bma-Chr7:5727607 3.59E-128 dispersed
Bma07g00473 Bma-Chr7:5727607 Bma11g00350 Bma-Chr11:3659451 2.09E-123 dispersed
Bma03g00877 Bma-Chr3:8527076 Bma07g00473 Bma-Chr7:5727607 2.53E-48 transposed
Bma01g01781 Bma-Chr1:60575102 Bma07g00473 Bma-Chr7:5727607 2.53E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66598 PF07714 PK_Tyr_Ser-Thr 5.30E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00473 - - mnt:21390697 722.62