Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00477 ATGGCGAAGGCCCTCTTCTTCTTGTTCCTCCTTCTTGCCCTAGTTTCCTTTTCGATCCAAAGCGATGACTTAGTTGACCCTAATTCGACGGATATTCCTGTGTTGGCGCCGTCGCTGGCCCACGCTGAACTAGTCAACTTTGGCTTCCCGATCGGCCTCTTACCCTCCTCCGTCAAGAGCTACAATCTTAACGAGACCTCCGGAGTCTTCTCCGTCGACCTTGGTGATTTGTGCAAGATCACTCTCCCGCCGGACAACTACTTGGCCTCCTATTCGAAGAAAATTACCGGAAAAATAGTCAAAGGTCGAATTCACGAGCTCGATGGGATTCGAGTTCGAGCTCTATTCCAGTGGTGGTCGATTACTGGGATTAGGTCTAATGGCGAGGATTTGGTCTTCGAGGTAGGGGTGGTTACTGTAAAGTATATGCTCAACGAGGCGAGTAAGAAGCAGGAGTCAAGAGCGGTTTCATCCAGTCCTAGTAATCAAACTCCCTCCAGGAAGCAACACAGAAAGGCAGAAAATCCCATTCGACTATCACCAAACCCTATGAATACTATGGATTTTGGAAATTCAAGCTCCTGGATCTGTAAAAATTCTGCTTGCAAAGCTGTTTTATCAATATGTGACACGTTTTGCAGGAGGTGCTCTTGCTGCATATGCCACTTATTTGACGACAACAAGGACCCTAGTCTTTGGTTGGTTTGCTCAACTGAATCTGGTCAGGAAGACTCCTGTGGGTTATCTTGCCACATTGAATGTGCCTTTCAGCGTAAAAAGGTGGGAGTTGTTGATCTTGGGCAATTAATGCAGCTCGATGGTAGCTACTGCTGTGCTTCGTGTGGCAAAGTTTCTGCAATAATCGGGTGCTGGAAGAGACAGCTAGTAAAAGCGAAGGATGCTCGTCGTATAGATGTGCTCTGTCATAGGATAGATTTGAGTTACCGGCTCCTTGACGGGACTTCAAGATTTATAGAACTTCATGACATTGTCAAGGATGTTAAGGCTAAACTCGAAACAGAAGTGGGTCCAGTGAATGGAATTTCTGCAAAGATGGCTCGAGGGATTGCTTGTAGACTCTCGGTTGCAGGTGATTTGCAGAAACTTTGCTCCCTAGCCATAGAAAAAGCGGATAAATTGCTGGCAGCAGCTTCTGCTGTGTATCCAAGTTGCAGAGAAGATTCACTACCGGCTGCTTGTAAGTTTCTTTTTGAAGAGATAACATCGTCCTCCGTTTTGATCATCTTGATTGAACCTTCAAATGCTTCATCTGATAGTATAAAGGGATATAAACTCTGGTACTGCCGGAGTGGTCAAGATGCATATACCAAAGATCCAATTTATGTAGTTCCGAGGGTCCAGCGAATGATTTTGATATCAAAACTACAAGCTTGCACGGAATATAGATTCAAAATTATCTCATATTCAGAAAACTGTGATTTGGGTCACTCTGAAGCTAAGTGTTTTACAAAAAGTGTGGAGATAGTTAAAAAGAACTCCATTTCAGCGCTACCCTTAAAATCTAAGAACGAAAGACTCTCTCTAGAAGGAAGTTCAGCCAGTCAGAAAGGGCCTTACAATACGAAAGTTATTGGTTTGTCTTCTGGATTCAAAGTTCGAGATATGGGAAGCATCATTCGTCTATCGAGGGATCCTGCGGAATGCTTTGTTAAGCCAGAAAATTCAGAAGAGCTGCTGCCTCCTGTTTGCCGTGGGCTCGACTTGAATGTTGTTTCAGTTTCAGTACCTGATTTAAATGAAGACATAACCCTTCCATTTGAATTTTCTAGAGATGAAGATGATGGATGCACTTTGCAGGAGGCTATGGAGGCAGATGATGATTCTGCCTCTCGGGAAGTGGAGAAAAATGGTCTGGCAAGATCACACGGTAGCGGTGACTCGCAGACCTGGACATGCGGACCCGCTGGAGAAGTCCCTGCTGTGGATTCCTGGATGAAGATTTGCAGGAAAAGGACAGGCGGTAAAACTGAGGAGATCCATGATTGTGATAGCACTCTGATCAATAGCTCCCCGTTCAGAATCTCAAACGGGTCGAGTTTCTTGGACGAGAATTTTGAATATTGCGTGAAGATAATCCGATGGCTGGAATGCGAAGGACACATTAAACATGAGTTTCGATTAAAATTGCTCACATGGTTCAGCTTAAGATCGACGGAACAAGAACGAAGGGTAGTTAACACCTTCATACTGACCTTGATTGACGATCCTGGTAGCTTGGCTGGACAATTGGTTGATTCGTTTTCAGATATCGTATCCTGCAAGAGGCCACGAAACGGAAACGGATTCTGTGGTAAGTTGTGGCATTGA 2328 44.76 MAKALFFLFLLLALVSFSIQSDDLVDPNSTDIPVLAPSLAHAELVNFGFPIGLLPSSVKSYNLNETSGVFSVDLGDLCKITLPPDNYLASYSKKITGKIVKGRIHELDGIRVRALFQWWSITGIRSNGEDLVFEVGVVTVKYMLNEASKKQESRAVSSSPSNQTPSRKQHRKAENPIRLSPNPMNTMDFGNSSSWICKNSACKAVLSICDTFCRRCSCCICHLFDDNKDPSLWLVCSTESGQEDSCGLSCHIECAFQRKKVGVVDLGQLMQLDGSYCCASCGKVSAIIGCWKRQLVKAKDARRIDVLCHRIDLSYRLLDGTSRFIELHDIVKDVKAKLETEVGPVNGISAKMARGIACRLSVAGDLQKLCSLAIEKADKLLAAASAVYPSCREDSLPAACKFLFEEITSSSVLIILIEPSNASSDSIKGYKLWYCRSGQDAYTKDPIYVVPRVQRMILISKLQACTEYRFKIISYSENCDLGHSEAKCFTKSVEIVKKNSISALPLKSKNERLSLEGSSASQKGPYNTKVIGLSSGFKVRDMGSIIRLSRDPAECFVKPENSEELLPPVCRGLDLNVVSVSVPDLNEDITLPFEFSRDEDDGCTLQEAMEADDDSASREVEKNGLARSHGSGDSQTWTCGPAGEVPAVDSWMKICRKRTGGKTEEIHDCDSTLINSSPFRISNGSSFLDENFEYCVKIIRWLECEGHIKHEFRLKLLTWFSLRSTEQERRVVNTFILTLIDDPGSLAGQLVDSFSDIVSCKRPRNGNGFCGKLWH 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5781557 5788339 - Bma025270.1 Bma07g00477 85614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00477 775 MobiDBLite consensus disorder prediction 609 641 - -
Bma07g00477 775 PANTHER VIN3-LIKE PROTEIN 1 143 775 - -
Bma07g00477 775 Pfam PHD - plant homeodomain finger protein 197 315 IPR032881 -
Bma07g00477 775 MobiDBLite consensus disorder prediction 151 184 - -
Bma07g00477 775 ProSiteProfiles Fibronectin type-III domain profile. 396 495 IPR003961 GO:0005515
Bma07g00477 775 SUPERFAMILY At5g01610-like 37 143 IPR036758 -
Bma07g00477 775 SUPERFAMILY Fibronectin type III 403 477 IPR036116 GO:0005515
Bma07g00477 775 MobiDBLite consensus disorder prediction 611 626 - -
Bma07g00477 775 Gene3D - 35 154 IPR036758 -
Bma07g00477 775 CDD PHD_VIN3_plant 217 281 - -
Bma07g00477 775 Gene3D Immunoglobulins 381 486 IPR013783 -
Bma07g00477 775 MobiDBLite consensus disorder prediction 151 166 - -
Bma07g00477 775 PANTHER VIN3-LIKE PROTEIN 2-RELATED 143 775 IPR044514 GO:0010048|GO:0040029
Bma07g00477 775 Pfam Protein of unknown function, DUF538 42 142 IPR007493 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma06g01054 Bma07g00477 CCT
Bma01g00411 Bma07g00477 CCT
Bma06g01054 Bma07g00477 ECH
Bma01g00411 Bma07g00477 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00411 Bma-Chr1:3442039 Bma07g00477 Bma-Chr7:5781557 0 dispersed
Bma01g01376 Bma-Chr1:21384879 Bma07g00477 Bma-Chr7:5781557 7.70E-22 dispersed
Bma07g00477 Bma-Chr7:5781557 Bma13g00076 Bma-Chr13:879533 1.30E-16 dispersed
Bma01g01778 Bma-Chr1:60522800 Bma07g00477 Bma-Chr7:5781557 0 transposed
Bma01g01777 Bma-Chr1:60509580 Bma07g00477 Bma-Chr7:5781557 3.89E-94 wgd
Bma06g01054 Bma-Chr6:47356756 Bma07g00477 Bma-Chr7:5781557 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00477 - - pvy:116114801 916.761