Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00479 ATGTTCCGTTATGATATACTCGCCGGAATCACCATTGCTAGCCTCGCCATTCCTCAGGGAATAAGCTATGCGAAGCTCGCTTCTCTTCCTCCTATTATTGGACTCTGTAAGGTCCATAATCAAAAACTTTTTCTGGTTTTCACTGTTTTCTGGTTAACTGACTTTGATTATCGTTATTCAGATTCTAGCTTCGTTCCACCTCTTGTTTACGCCATTTTTGGAAGCTCTAAGCATTTGGCTGTAGGAACAGTGGCCGCTTGCTCGTTGCTTATTGCTGATACGATCGGCTCCGTCGCTTCCCCAAAAACTGATCCTACATTATATCTTCATCTGGTTTTCACCTCTACCTTTGTAACAGGCGTTGTTCAAGCAGCTCTAGGAATTCTAAGATTAGGGATTTTGGTGGATTTTTTATCTCATTCCACAATCACTGGATTCATGGGAGGAACAGCCACTATTATTTGTCTTCAACAGCTGAAGGGTCTTTTTGGACTGACTCATTTCACCACCAAAACTGACGTTGTTTCTGTTCTTCGTGCTGTCATCACCAATAGACACGAGTGGAAGTGGGAGAGTGCAGTTGTAGGTTTAGTCTTCCTAACTTTCCTTCAATTCACTAGATACCTGAGAAACAGAAATCCTAAGTTGTTTTGGGTATCAGCAATAGCTCCGATGATTACCGTAATTGTTGGATGTGTCTTTGCTTACTTCATTCATGGAGAAAACCATGGAATCCTAATTGTGGGTGACCTGAAGAAAGGAATAAACCCTCTATCCATTCAGTTTCTCAACTTTAACTCCAAATATTTCTCGCCTGTAGTAAAAGCTGGTGTCGTCACTGGATTTGTGGCTTTGGCTGAAGGGATAGCCATTGGAAGGAGCTTCGCTATAATGAAAAATGAACAAGTTGATGGGAACAAAGAGATGGTGGCTTTTGGCCTCATGAACATCATCGGATCCTTGACTTCTTGCTATTTAACCACGGGGCCATTTTCGAAGACAGCAGTAAACTTCAACGCAGGATGTCGGACAGCAATGTCGAATGTAGTAATGGCTGTCTGCATGGCGCTGACTCTTCTCTTTCTAGCTCCTCTTTTCAGTTACACTCCTCTTGTCGCTCTCTCTGCAATTATCATGTCTGCCATGTTTGGCCTCATTAAATACGAAGAAGCTTTTCACCTTTTCAAGGTTGACAAGTTCGATTTCGTCATCTGCATGGCTGCTTTCTTCGGCGTTACCTTCCTGACCATGGACGTGGGTCTCATGATGTCTGTAAGAGTGACCGCCATTGACGTCACTGGCATTGAAGCTTTGACAGAAATACACAGAACCTTGGAATCAAAAGGAATTAAGATGGGAATAATAAACCCTAGAAGGGACGTGATGGAGAAGATGACACTTTCAAAGCTTACGGACAGAATAGGGAAAGAGTTCATCTTCTTTAGCATAGAAGATGCAGTAGAATCATGTCGTTTTTCACTTCAAAAGATGATGCAAAACGTGGACGACCATCAAACTGCAGATTAA 1527 42.5 MFRYDILAGITIASLAIPQGISYAKLASLPPIIGLCKVHNQKLFLVFTVFWLTDFDYRYSDSSFVPPLVYAIFGSSKHLAVGTVAACSLLIADTIGSVASPKTDPTLYLHLVFTSTFVTGVVQAALGILRLGILVDFLSHSTITGFMGGTATIICLQQLKGLFGLTHFTTKTDVVSVLRAVITNRHEWKWESAVVGLVFLTFLQFTRYLRNRNPKLFWVSAIAPMITVIVGCVFAYFIHGENHGILIVGDLKKGINPLSIQFLNFNSKYFSPVVKAGVVTGFVALAEGIAIGRSFAIMKNEQVDGNKEMVAFGLMNIIGSLTSCYLTTGPFSKTAVNFNAGCRTAMSNVVMAVCMALTLLFLAPLFSYTPLVALSAIIMSAMFGLIKYEEAFHLFKVDKFDFVICMAAFFGVTFLTMDVGLMMSVRVTAIDVTGIEALTEIHRTLESKGIKMGIINPRRDVMEKMTLSKLTDRIGKEFIFFSIEDAVESCRFSLQKMMQNVDDHQTAD 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5799909 5803871 - Bma025272.1 Bma07g00479 85616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00479 508 SUPERFAMILY SpoIIaa-like 427 490 IPR036513 -
Bma07g00479 508 Gene3D STAS domain 421 494 IPR036513 -
Bma07g00479 508 Pfam Sulfate permease family 2 408 IPR011547 GO:0016021
Bma07g00479 508 ProSiteProfiles STAS domain profile. 427 490 IPR002645 -
Bma07g00479 508 PANTHER SULFATE TRANSPORTER 3.5-RELATED 2 428 IPR030316 GO:1902358
Bma07g00479 508 PANTHER SULFATE TRANSPORTER 3.5-RELATED 427 499 IPR030316 GO:1902358
Bma07g00479 508 PANTHER SULFATE TRANSPORTER 2 428 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma07g00479 508 PANTHER SULFATE TRANSPORTER 427 499 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma07g00479 508 CDD STAS_SulP_like_sulfate_transporter 421 483 - -
Bma07g00479 508 Pfam STAS domain 427 486 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00479 Bma-Chr7:5799909 Bma15g00623 Bma-Chr15:7974865 1.57E-10 dispersed
Bma01g01775 Bma-Chr1:60482558 Bma07g00479 Bma-Chr7:5799909 1.37E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00479 K17471 - csv:105435742 655.595