Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00481 ATGGATACTCGCAGTAATGGAAGCTCCGATTCTATTGCATCGCTTATCCCAGAAATTAAGTTTACGAAGCTGTTCATCAATGGCGAATTCGTTGACTCAGTTTCAGGAAAAACGTTCGAAACGATCGATCCAAGAACAGAGGAGGTGATAGCGGAGATAGCAGAAGGAGACGAAAAGGACGTTGATTTGGCCGTGAAAGCTGCCCGTGAAGCCTTTGATCATGGCCCATGGCCGCGCTTACCTGGTTTTGAAAGGGGAAAGATAATGATGAAATTCGCAAACTTGGTGGACGAACACGTGGAAGAGCTAGCTGCTCTAGACGCCATTGATGCCGGTAAGCTATATACTCTTGGAAAGGCCTTAGACATTCCAGAATCAGCAAATACGCTGCGTTACTACGCCGGCGCCGCCGATAAGATTCATGGGGAGGTACTAAAAATGGGTCGCGACCTCCATGGTTACACTCTACTAGAGCCAGTCGGCGTCGTCGGCCATATAATCCCTTGGAATTTCCCCTCCATCATGTTCTTCGCCAAGGTCAGCCCTGCGTTGGCCGCTGGCTGCACCATGATCGTCAAGCCGGCTGAGCAAAGCCCGCTCTCGGCGCTCTACTATGCTCATCTTGCTAAACTGGCTGGTATTCCCGACGGAGTGCTGAACGTGGTAACCGGATTTGGAAAAACAGCCGGGGCAGCCCTATGCTCTCACATGGATGTGGATAAAATAAGCTTCACTGGCTCCACAGAAGTTGGGCGACAAATAATGCACGCCTCAGCTAGCAGCAATTTGAAGTCGCTGTGTCTAGAATTAGGAGGCAAATCACCCCTTATAATCTTTGATGATGCTGATTTAGATCAAGCTGCTCAGCTTGCTCTCGTTGGCATTCTCTTCAACAAGGGAGAGATTTGCGTAGCAGGTTCGAGAGTTTTTGTTCAAGAAGGAATTTACAATGAACTCGTGAAAAAACTAGTGGAATTGGCGAAGGGATGGGTGGTGGGAGACCCTTTTGATCCTAAATCTCAACAAGGACCACAGGTGGATAAGAAACAGTTTGAGAAAATTCTTTCCTACATCGAGAGTGGAAAGAGAGAAGGAGCCACTTTGCTGACCGGTGGTAAACCCATTGGCAACAAGGGCTATTTCGTTGAGCCTACCATTTTTACCGATGTCAAGGAACATATGGCTATATTTCAAGAAGAAATATTTGGACCATTCATGTGTCTTATGAAATTCAAGACGATAGAGGAGGTGATAAAGAGTGCGAACAACACGAAATACGGGCTAGCAGCTGGCGTCGTGACAAAGAACATAGACATAGCAAACACAGTGTCAAGGTCGGTAAAAGCCGGCATCGTGTGGGTCAACTGCTACCTTGCTTTCGATCGAGGCTGCCCTTACGGAGGCTACAAGATGAGCGGTTTTGGTCGAGATTTTGGGATGGAAGCCCTCAACAACTATCTCCAAATCAAATCTGTTGTCACTCCTTTGTACAACACCCCTTGGCTTTGA 1509 47.58 MDTRSNGSSDSIASLIPEIKFTKLFINGEFVDSVSGKTFETIDPRTEEVIAEIAEGDEKDVDLAVKAAREAFDHGPWPRLPGFERGKIMMKFANLVDEHVEELAALDAIDAGKLYTLGKALDIPESANTLRYYAGAADKIHGEVLKMGRDLHGYTLLEPVGVVGHIIPWNFPSIMFFAKVSPALAAGCTMIVKPAEQSPLSALYYAHLAKLAGIPDGVLNVVTGFGKTAGAALCSHMDVDKISFTGSTEVGRQIMHASASSNLKSLCLELGGKSPLIIFDDADLDQAAQLALVGILFNKGEICVAGSRVFVQEGIYNELVKKLVELAKGWVVGDPFDPKSQQGPQVDKKQFEKILSYIESGKREGATLLTGGKPIGNKGYFVEPTIFTDVKEHMAIFQEEIFGPFMCLMKFKTIEEVIKSANNTKYGLAAGVVTKNIDIANTVSRSVKAGIVWVNCYLAFDRGCPYGGYKMSGFGRDFGMEALNNYLQIKSVVTPLYNTPWL 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5816668 5823562 - Bma025274.1 Bma07g00481 85618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00481 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 502 - -
Bma07g00481 502 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 4 502 - -
Bma07g00481 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Bma07g00481 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Bma07g00481 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Bma07g00481 502 Pfam Aldehyde dehydrogenase family 30 492 IPR015590 GO:0016491
Bma07g00481 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491
Bma07g00481 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00407 Bma-Chr1:3396971 Bma07g00481 Bma-Chr7:5816668 0 dispersed
Bma06g01043 Bma-Chr6:47255350 Bma07g00481 Bma-Chr7:5816668 0 dispersed
Bma07g00481 Bma-Chr7:5816668 Bma12g01022 Bma-Chr12:42322685 1.11E-125 dispersed
Bma01g00054 Bma-Chr1:575450 Bma07g00481 Bma-Chr7:5816668 0 transposed
Bma05g00591 Bma-Chr5:35840271 Bma07g00481 Bma-Chr7:5816668 6.06E-101 transposed
Bma08g00029 Bma-Chr8:465816 Bma07g00481 Bma-Chr7:5816668 1.66E-64 transposed
Bma12g00367 Bma-Chr12:6536750 Bma07g00481 Bma-Chr7:5816668 2.39E-97 transposed
Bma09g00142 Bma-Chr9:4826596 Bma07g00481 Bma-Chr7:5816668 1.23E-37 transposed
Bma01g01773 Bma-Chr1:60456044 Bma07g00481 Bma-Chr7:5816668 0 wgd
Bma11g00506 Bma-Chr11:6312388 Bma07g00481 Bma-Chr7:5816668 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00481 K12355 - fve:101301128 807.364