Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00513 | TTATCAGCAATGTCAGACCAACCAAACTCGGAGACTGAGTCAGGCTTCACCAACTTGTCTTCTTCACCGTCCTCATCGCCCGGAGAATCGACTGCTCAATCGCCACAGAAACGATCAGCTCAAAATATCAATCCTGACCATCCCGTTTTCCGGGGAGTCCGAAAGCGAGCTTGGGGCAAATGGGTGTCTGAAATCCGACAACCCAGAAAGAAAAATCGGATCTGGCTCGGAACTTTTTCTACACCGGAAATGGCCGCTCGAGCTCACGACGTCGCCGCTTTAAGCATAAAAGGAAACTCCGCCATTCTCAACTTCCCAGAACTCGCCGAAGCTCTCCCCCGCCCGGCTTCCAACTCCCCTCGAGATGTGCAAGTCGCCGCTGCGAAAGCCGCTTCAATGGAGTTTCCCTTTCCTTCACTGACGTCGCCATCGCCGATCACTCAGTCTTCTTCCGCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCATCTTCCCTATCGTCTTTAGAGGAATCGACGCCGGAGGAGCTCAGTGAGATTGTACGCTTGCCGAGCTTAGGAACGAGTTACTGCTCTCCTGACTCCGGTAACGAGCTGGTCTTCGTTGACTCAGTGGAAGCCTTTCTTTATCCTTACCCATGGTATCAAAGCATAAATGAAGATGAACCTTTCTGTTTGTCAATGGCGGAAACAGAGTCAGTGATTCCTTCAGTCTGTGAAGCGTCCTTGTGCCTGCATTAA | 738 | 50.81 | LSAMSDQPNSETESGFTNLSSSPSSSPGESTAQSPQKRSAQNINPDHPVFRGVRKRAWGKWVSEIRQPRKKNRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPELAEALPRPASNSPRDVQVAAAKAASMEFPFPSLTSPSPITQSSSASSSSSSSSSSSSLSSLEESTPEELSEIVRLPSLGTSYCSPDSGNELVFVDSVEAFLYPYPWYQSINEDEPFCLSMAETESVIPSVCEASLCLH | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 6393305 | 6394042 | + | Bma025314.1 | Bma07g00513 | 85650 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00513 | 245 | Pfam | AP2 domain | 48 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | PRINTS | Ethylene responsive element binding protein signature | 50 | 61 | IPR001471 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | PRINTS | Ethylene responsive element binding protein signature | 72 | 88 | IPR001471 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | SMART | rav1_2 | 49 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | CDD | AP2 | 50 | 108 | IPR001471 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | ProSiteProfiles | AP2/ERF domain profile. | 49 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 8 | 221 | - | - | |
Bma07g00513 | 245 | Gene3D | AP2/ERF domain | 49 | 107 | IPR036955 | GO:0003700|GO:0006355 | |
Bma07g00513 | 245 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Bma07g00513 | 245 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 8 | 221 | - | - | |
Bma07g00513 | 245 | MobiDBLite | consensus disorder prediction | 142 | 172 | - | - | |
Bma07g00513 | 245 | SUPERFAMILY | DNA-binding domain | 49 | 107 | IPR016177 | GO:0003677 | |
Bma07g00513 | 245 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01347 | Bma-Chr1:19155929 | Bma07g00513 | Bma-Chr7:6393305 | 9.95E-62 | dispersed | |
Bma04g00408 | Bma-Chr4:3312757 | Bma07g00513 | Bma-Chr7:6393305 | 3.68E-59 | dispersed | |
Bma06g00036 | Bma-Chr6:646393 | Bma07g00513 | Bma-Chr7:6393305 | 2.63E-23 | dispersed | |
Bma07g00513 | Bma-Chr7:6393305 | Bma07g01043 | Bma-Chr7:41991004 | 1.05E-55 | dispersed | |
Bma01g02441 | Bma-Chr1:82036124 | Bma07g00513 | Bma-Chr7:6393305 | 3.43E-35 | transposed | |
Bma13g00765 | Bma-Chr13:26465584 | Bma07g00513 | Bma-Chr7:6393305 | 4.98E-52 | transposed | |
Bma15g00586 | Bma-Chr15:7347116 | Bma07g00513 | Bma-Chr7:6393305 | 8.71E-42 | transposed | |
Bma11g00534 | Bma-Chr11:6799293 | Bma07g00513 | Bma-Chr7:6393305 | 9.46E-104 | wgd | |
Bma06g00819 | Bma-Chr6:41823166 | Bma07g00513 | Bma-Chr7:6393305 | 8.74E-63 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
57611 | PF00847 | AP2 | 1.10E-13 | CL0081 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00513 | K09286 | - | vvi:100252531 | 234.187 |