Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00546 ATGAGGATGGAGATGCCTCTGATTCTTCAGCTGGGAATTCTGCTGTTCATTTCCAGCGATTTCTCCGTACGAGGATCTGCAGGGTTCGGTACATCCCCATCCTCGACAACCTTTTTTGCAATTCCATCATCCGAAACAGCTCCTGGCCTTGCAAATCACAGCCAGCCACCGACATACAATGCACCAGCCTCACCGTCTCAGCCAAATGGATCGGTTTTGCTACCGCCACTTGCATTATCGCCTTCTCCGACAGCATTGCCACCCATGACGAGTAAAGGGGCATTGGCACCGCTGTCTGGATCATCCCCTCTCCATAATCTATCTCCACATCCCTTTAATGTTCAAAGGCAAGCTCCTTCGATAGCATCAAGTGAAGCTCCGATGAAAGCACCCATCGAAAACCCTCCATTTTCGGTTGCTCCAGCTCCATTTGAAAGTCCTTCGAAGATTTTACCTCAATATCCACCATCCAGATCTCCAACCACGCCACTAGCTTCGCCGCCAACTGCTGATGTAGGAAATATGGCCCCTGTCGCAGGGCCACTTGCACCAGACCATGATATTCCTCCATCTTTCGCTACTTCCCCAACCCCTCCCGCTAAGAAGAGGATCGAAGTGCCAGCTTCAGCTCCTTCTATCAACATGCCCAAATATTCACCACCAACGAATGATGACTTGTATAAAGGACCTTCCCCGGACAGTTCCATGAGGCGCTCACATTATGGTCATCCTCCATTTTCATCTCCTAACCCTCCTTTCCATCAAAGAGATCATCGGCCCGCATTGTCTCCGGCAATCTCATATACTAAGCATAACCGTTCGAGAAGTAAAATCATCAGTCCTCCGCCTGCTCCATCATACCCTGTTTCTTCTCGAACTCCAGTTGTTTCTCCATCATTTCTTCCCAGAAGCAGGACAAGAGACCATTCTCCTACACCATCGGATTCAGACTCTCGAATTTCTCCGTTCCATTCCTTTCCTCTGCCTTCGAGGCATGTTTTGCCTCCTCATCCGTCTCAAAAAATTCCCTCCGGTGCTGCACGTGTGCCCGTTTCTCCCCCTAAGGTTTCGCCGGCAAAGCCCTCGAAATATGGTCCGAAGACACCACTACTACCACCATTAAAAGCATTTCCTCCTCCACCTCCCAATCCAGATTGTTTAGGGACCATTTGCACAGACCCCTATACAAATACTCCCCCGAACTCACCCTGCGCCTGTGTGTTGCCGATCCAAGTTGGCCTTCGACTCGGTATCGATCTTTATACCTTCTTTCCACTTGTCTCGGAGCTGGCTAAGGAAATCGCTGCTTCAATTTTTCTGAAACAAAGCCAAGTTCGCATAATTGGAGCCAGTGCAGCAAACCAACAAGCTGAAAAAACTGTCGTTCTTATCGACTTGGTTCCTCTGGGGGAAAAGTTTGACTTCACTACGGCCTTGTTGACTTATCATCGGTTTTGGCTTAAACAAGTTGCCATAAATGCTTCCTTCTTTGGTGATTATGAAGTATTGTATGTTCAATATCCAGGTTTACCTCCGTCTCCTCCTGGAGTGCCGAATATAAATAGTCAGCCTTATTCGGGAAACAATAGTAATAACAATAACAACAATGGAAGGACGATAAAGCCGATTGGAGTTGATGTACATAGTAGACGACATAATGATCGGCTTAACGGTGGCATGATTGCTATCATAGCTCTCTCGACCTTTTTAGCCGTGGTTTTTTGCATAGCTGTTGCTTGGATTTTGGTGTTCGGACAAAGAGACTGTTTTAGGCTGCAAAAGGCGGCCCCAGAGGCTTTATTATCTTCCCTTTCTAAGCCCTCAGGCATGGCTGGCTCAACAATTGGAAGTATGCGCAGTTCTGTTTCTTTATCACTCGAGTCTAGTATGGCGACATATATGGGATCTGCTAAGACATTTAGTGCGAATGACATGGAGAGGGCCACAAACCATTTTGATCCTTCGAGAATACTTGGGGAAGGTGGATTTGGACGTGTTTACAGTGGCGTTCTTGAAGATGGAATGAAAGTGGCAGTAAAAGTTTTAAAGAGGGACGATCACCATGGCGGTCGGGAATTCTGTGCCGAAGTCGAAATGCTGAGCCGTCTCCATCATCGGAATTTGGTAAAGTTAATCGGCATATGCACGGAGGATCATATCCGCTGCCTTGTCTACGAACTCATTCCAAACGGCAGCGTTGAATCTCATTTACATGGAGTTGACAAGGAAAAAGCTCCCCTTGATTGGACCACTCGCATGAAGATAGCACTTGGAGCTGCAAGGGGTCTGGCTTATCTCCATGAGGATTCAAGCCCTCGAGTCATACATCGGGACTTCAAAGCCAGCAACATTTTGCTAGAACACGATTTCACTCCGAAAGTATCTGACTTCGGTTTGGCTCGAACGGCTATGGACGAGGAAAGCAGACATATATCGACACGAGTCATGGGAACTTTTGGGTACGTTGCGCCCGAGTATGCTATGACTGGTCATCTTCTCGTGAAGAGTGATGTTTATAGCTATGGAGTTGTCCTCCTTGAACTTCTTACCGGAAGAAAACCCATAGACATGTCACAGCCACCAGGCCGAGAAAACCTGGTCGCGTGGACCCGTTCACTCCTCACGAGTAGAGAAGGATTGGAATCGATAATTGATAAATCTTTGGGTTCTAATGCTCCTTTTGACAGCATTGCCAAAGTGGCTGCCATTGCTTCTATGTGTGTGCAGCCGGAAGTATCGAATCGTCCTTTCATGGGGGAGGTCGTTCAAGCTCTTAAACTAGTATGCAACGAGTGTGACGAAAAAAGAAAATCAGGGTCGAGGGGTTCGAGCCGGGAAGATATCTCGATTGACATTGATGCCGACCCGGAAAGCAGGGGCTTGAGACAATTTCGTCATTCTTTGTATGGTCAATACTCACCACCTAACTTTGACAATGGGATGGATTCTGAAACAAGGCTGTCGATTTCGGAATTGTTGAGTTCGTCTGCGAGATTTCAAATGCAGGAGTCTAGATCGTTTCAAAGGCAATCAAGCTCGGGTCCATTGAGTGCGAGAAGAGGCAGGCCGATCTGGCAAAGGATGAGATTTTCTGGCGAAAGTGTGAGCGAAAGCGGATTCAATACCAGATTTTGGCCGGGATCGAACTGA 3150 47.49 MRMEMPLILQLGILLFISSDFSVRGSAGFGTSPSSTTFFAIPSSETAPGLANHSQPPTYNAPASPSQPNGSVLLPPLALSPSPTALPPMTSKGALAPLSGSSPLHNLSPHPFNVQRQAPSIASSEAPMKAPIENPPFSVAPAPFESPSKILPQYPPSRSPTTPLASPPTADVGNMAPVAGPLAPDHDIPPSFATSPTPPAKKRIEVPASAPSINMPKYSPPTNDDLYKGPSPDSSMRRSHYGHPPFSSPNPPFHQRDHRPALSPAISYTKHNRSRSKIISPPPAPSYPVSSRTPVVSPSFLPRSRTRDHSPTPSDSDSRISPFHSFPLPSRHVLPPHPSQKIPSGAARVPVSPPKVSPAKPSKYGPKTPLLPPLKAFPPPPPNPDCLGTICTDPYTNTPPNSPCACVLPIQVGLRLGIDLYTFFPLVSELAKEIAASIFLKQSQVRIIGASAANQQAEKTVVLIDLVPLGEKFDFTTALLTYHRFWLKQVAINASFFGDYEVLYVQYPGLPPSPPGVPNINSQPYSGNNSNNNNNNGRTIKPIGVDVHSRRHNDRLNGGMIAIIALSTFLAVVFCIAVAWILVFGQRDCFRLQKAAPEALLSSLSKPSGMAGSTIGSMRSSVSLSLESSMATYMGSAKTFSANDMERATNHFDPSRILGEGGFGRVYSGVLEDGMKVAVKVLKRDDHHGGREFCAEVEMLSRLHHRNLVKLIGICTEDHIRCLVYELIPNGSVESHLHGVDKEKAPLDWTTRMKIALGAARGLAYLHEDSSPRVIHRDFKASNILLEHDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQPPGRENLVAWTRSLLTSREGLESIIDKSLGSNAPFDSIAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEKRKSGSRGSSREDISIDIDADPESRGLRQFRHSLYGQYSPPNFDNGMDSETRLSISELLSSSARFQMQESRSFQRQSSSGPLSARRGRPIWQRMRFSGESVSESGFNTRFWPGSN 1049
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7408152 7412720 - Bma025362.1 Bma07g00546 85683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00546 1049 PANTHER OS01G0750732 PROTEIN 7 1048 - -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 47 368 - -
Bma07g00546 1049 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Bma07g00546 1049 MobiDBLite consensus disorder prediction 1003 1017 - -
Bma07g00546 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Bma07g00546 1049 Gene3D Phosphorylase Kinase; domain 1 623 727 - -
Bma07g00546 1049 ProSiteProfiles Protein kinase domain profile. 652 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00546 1049 MobiDBLite consensus disorder prediction 935 956 - -
Bma07g00546 1049 SUPERFAMILY Protein kinase-like (PK-like) 631 925 IPR011009 -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 354 368 - -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 47 73 - -
Bma07g00546 1049 Gene3D Transferase(Phosphotransferase) domain 1 728 949 - -
Bma07g00546 1049 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 7 1048 - -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 1003 1023 - -
Bma07g00546 1049 Pfam Protein tyrosine and serine/threonine kinase 656 925 IPR001245 GO:0004672|GO:0006468
Bma07g00546 1049 CDD STKc_IRAK 658 926 - -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 95 122 - -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 290 307 - -
Bma07g00546 1049 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00546 Bma-Chr7:7408152 Bma13g00737 Bma-Chr13:22676942 0 dispersed
Bma07g00537 Bma-Chr7:7094413 Bma07g00546 Bma-Chr7:7408152 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66602 PF07714 PK_Tyr_Ser-Thr 3.20E-50 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00546 - - vvi:100254143 1048.88