Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00546 | ATGAGGATGGAGATGCCTCTGATTCTTCAGCTGGGAATTCTGCTGTTCATTTCCAGCGATTTCTCCGTACGAGGATCTGCAGGGTTCGGTACATCCCCATCCTCGACAACCTTTTTTGCAATTCCATCATCCGAAACAGCTCCTGGCCTTGCAAATCACAGCCAGCCACCGACATACAATGCACCAGCCTCACCGTCTCAGCCAAATGGATCGGTTTTGCTACCGCCACTTGCATTATCGCCTTCTCCGACAGCATTGCCACCCATGACGAGTAAAGGGGCATTGGCACCGCTGTCTGGATCATCCCCTCTCCATAATCTATCTCCACATCCCTTTAATGTTCAAAGGCAAGCTCCTTCGATAGCATCAAGTGAAGCTCCGATGAAAGCACCCATCGAAAACCCTCCATTTTCGGTTGCTCCAGCTCCATTTGAAAGTCCTTCGAAGATTTTACCTCAATATCCACCATCCAGATCTCCAACCACGCCACTAGCTTCGCCGCCAACTGCTGATGTAGGAAATATGGCCCCTGTCGCAGGGCCACTTGCACCAGACCATGATATTCCTCCATCTTTCGCTACTTCCCCAACCCCTCCCGCTAAGAAGAGGATCGAAGTGCCAGCTTCAGCTCCTTCTATCAACATGCCCAAATATTCACCACCAACGAATGATGACTTGTATAAAGGACCTTCCCCGGACAGTTCCATGAGGCGCTCACATTATGGTCATCCTCCATTTTCATCTCCTAACCCTCCTTTCCATCAAAGAGATCATCGGCCCGCATTGTCTCCGGCAATCTCATATACTAAGCATAACCGTTCGAGAAGTAAAATCATCAGTCCTCCGCCTGCTCCATCATACCCTGTTTCTTCTCGAACTCCAGTTGTTTCTCCATCATTTCTTCCCAGAAGCAGGACAAGAGACCATTCTCCTACACCATCGGATTCAGACTCTCGAATTTCTCCGTTCCATTCCTTTCCTCTGCCTTCGAGGCATGTTTTGCCTCCTCATCCGTCTCAAAAAATTCCCTCCGGTGCTGCACGTGTGCCCGTTTCTCCCCCTAAGGTTTCGCCGGCAAAGCCCTCGAAATATGGTCCGAAGACACCACTACTACCACCATTAAAAGCATTTCCTCCTCCACCTCCCAATCCAGATTGTTTAGGGACCATTTGCACAGACCCCTATACAAATACTCCCCCGAACTCACCCTGCGCCTGTGTGTTGCCGATCCAAGTTGGCCTTCGACTCGGTATCGATCTTTATACCTTCTTTCCACTTGTCTCGGAGCTGGCTAAGGAAATCGCTGCTTCAATTTTTCTGAAACAAAGCCAAGTTCGCATAATTGGAGCCAGTGCAGCAAACCAACAAGCTGAAAAAACTGTCGTTCTTATCGACTTGGTTCCTCTGGGGGAAAAGTTTGACTTCACTACGGCCTTGTTGACTTATCATCGGTTTTGGCTTAAACAAGTTGCCATAAATGCTTCCTTCTTTGGTGATTATGAAGTATTGTATGTTCAATATCCAGGTTTACCTCCGTCTCCTCCTGGAGTGCCGAATATAAATAGTCAGCCTTATTCGGGAAACAATAGTAATAACAATAACAACAATGGAAGGACGATAAAGCCGATTGGAGTTGATGTACATAGTAGACGACATAATGATCGGCTTAACGGTGGCATGATTGCTATCATAGCTCTCTCGACCTTTTTAGCCGTGGTTTTTTGCATAGCTGTTGCTTGGATTTTGGTGTTCGGACAAAGAGACTGTTTTAGGCTGCAAAAGGCGGCCCCAGAGGCTTTATTATCTTCCCTTTCTAAGCCCTCAGGCATGGCTGGCTCAACAATTGGAAGTATGCGCAGTTCTGTTTCTTTATCACTCGAGTCTAGTATGGCGACATATATGGGATCTGCTAAGACATTTAGTGCGAATGACATGGAGAGGGCCACAAACCATTTTGATCCTTCGAGAATACTTGGGGAAGGTGGATTTGGACGTGTTTACAGTGGCGTTCTTGAAGATGGAATGAAAGTGGCAGTAAAAGTTTTAAAGAGGGACGATCACCATGGCGGTCGGGAATTCTGTGCCGAAGTCGAAATGCTGAGCCGTCTCCATCATCGGAATTTGGTAAAGTTAATCGGCATATGCACGGAGGATCATATCCGCTGCCTTGTCTACGAACTCATTCCAAACGGCAGCGTTGAATCTCATTTACATGGAGTTGACAAGGAAAAAGCTCCCCTTGATTGGACCACTCGCATGAAGATAGCACTTGGAGCTGCAAGGGGTCTGGCTTATCTCCATGAGGATTCAAGCCCTCGAGTCATACATCGGGACTTCAAAGCCAGCAACATTTTGCTAGAACACGATTTCACTCCGAAAGTATCTGACTTCGGTTTGGCTCGAACGGCTATGGACGAGGAAAGCAGACATATATCGACACGAGTCATGGGAACTTTTGGGTACGTTGCGCCCGAGTATGCTATGACTGGTCATCTTCTCGTGAAGAGTGATGTTTATAGCTATGGAGTTGTCCTCCTTGAACTTCTTACCGGAAGAAAACCCATAGACATGTCACAGCCACCAGGCCGAGAAAACCTGGTCGCGTGGACCCGTTCACTCCTCACGAGTAGAGAAGGATTGGAATCGATAATTGATAAATCTTTGGGTTCTAATGCTCCTTTTGACAGCATTGCCAAAGTGGCTGCCATTGCTTCTATGTGTGTGCAGCCGGAAGTATCGAATCGTCCTTTCATGGGGGAGGTCGTTCAAGCTCTTAAACTAGTATGCAACGAGTGTGACGAAAAAAGAAAATCAGGGTCGAGGGGTTCGAGCCGGGAAGATATCTCGATTGACATTGATGCCGACCCGGAAAGCAGGGGCTTGAGACAATTTCGTCATTCTTTGTATGGTCAATACTCACCACCTAACTTTGACAATGGGATGGATTCTGAAACAAGGCTGTCGATTTCGGAATTGTTGAGTTCGTCTGCGAGATTTCAAATGCAGGAGTCTAGATCGTTTCAAAGGCAATCAAGCTCGGGTCCATTGAGTGCGAGAAGAGGCAGGCCGATCTGGCAAAGGATGAGATTTTCTGGCGAAAGTGTGAGCGAAAGCGGATTCAATACCAGATTTTGGCCGGGATCGAACTGA | 3150 | 47.49 | MRMEMPLILQLGILLFISSDFSVRGSAGFGTSPSSTTFFAIPSSETAPGLANHSQPPTYNAPASPSQPNGSVLLPPLALSPSPTALPPMTSKGALAPLSGSSPLHNLSPHPFNVQRQAPSIASSEAPMKAPIENPPFSVAPAPFESPSKILPQYPPSRSPTTPLASPPTADVGNMAPVAGPLAPDHDIPPSFATSPTPPAKKRIEVPASAPSINMPKYSPPTNDDLYKGPSPDSSMRRSHYGHPPFSSPNPPFHQRDHRPALSPAISYTKHNRSRSKIISPPPAPSYPVSSRTPVVSPSFLPRSRTRDHSPTPSDSDSRISPFHSFPLPSRHVLPPHPSQKIPSGAARVPVSPPKVSPAKPSKYGPKTPLLPPLKAFPPPPPNPDCLGTICTDPYTNTPPNSPCACVLPIQVGLRLGIDLYTFFPLVSELAKEIAASIFLKQSQVRIIGASAANQQAEKTVVLIDLVPLGEKFDFTTALLTYHRFWLKQVAINASFFGDYEVLYVQYPGLPPSPPGVPNINSQPYSGNNSNNNNNNGRTIKPIGVDVHSRRHNDRLNGGMIAIIALSTFLAVVFCIAVAWILVFGQRDCFRLQKAAPEALLSSLSKPSGMAGSTIGSMRSSVSLSLESSMATYMGSAKTFSANDMERATNHFDPSRILGEGGFGRVYSGVLEDGMKVAVKVLKRDDHHGGREFCAEVEMLSRLHHRNLVKLIGICTEDHIRCLVYELIPNGSVESHLHGVDKEKAPLDWTTRMKIALGAARGLAYLHEDSSPRVIHRDFKASNILLEHDFTPKVSDFGLARTAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPIDMSQPPGRENLVAWTRSLLTSREGLESIIDKSLGSNAPFDSIAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEKRKSGSRGSSREDISIDIDADPESRGLRQFRHSLYGQYSPPNFDNGMDSETRLSISELLSSSARFQMQESRSFQRQSSSGPLSARRGRPIWQRMRFSGESVSESGFNTRFWPGSN | 1049 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7408152 | 7412720 | - | Bma025362.1 | Bma07g00546 | 85683 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00546 | 1049 | PANTHER | OS01G0750732 PROTEIN | 7 | 1048 | - | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 47 | 368 | - | - | |
Bma07g00546 | 1049 | ProSitePatterns | Protein kinases ATP-binding region signature. | 658 | 680 | IPR017441 | GO:0005524 | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 1003 | 1017 | - | - | |
Bma07g00546 | 1049 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 774 | 786 | IPR008271 | GO:0004672|GO:0006468 | |
Bma07g00546 | 1049 | Gene3D | Phosphorylase Kinase; domain 1 | 623 | 727 | - | - | |
Bma07g00546 | 1049 | ProSiteProfiles | Protein kinase domain profile. | 652 | 928 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 935 | 956 | - | - | |
Bma07g00546 | 1049 | SUPERFAMILY | Protein kinase-like (PK-like) | 631 | 925 | IPR011009 | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 354 | 368 | - | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 47 | 73 | - | - | |
Bma07g00546 | 1049 | Gene3D | Transferase(Phosphotransferase) domain 1 | 728 | 949 | - | - | |
Bma07g00546 | 1049 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 7 | 1048 | - | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 1003 | 1023 | - | - | |
Bma07g00546 | 1049 | Pfam | Protein tyrosine and serine/threonine kinase | 656 | 925 | IPR001245 | GO:0004672|GO:0006468 | |
Bma07g00546 | 1049 | CDD | STKc_IRAK | 658 | 926 | - | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 95 | 122 | - | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 290 | 307 | - | - | |
Bma07g00546 | 1049 | MobiDBLite | consensus disorder prediction | 134 | 163 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00546 | Bma-Chr7:7408152 | Bma13g00737 | Bma-Chr13:22676942 | 0 | dispersed | |
Bma07g00537 | Bma-Chr7:7094413 | Bma07g00546 | Bma-Chr7:7408152 | 0 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66602 | PF07714 | PK_Tyr_Ser-Thr | 3.20E-50 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00546 | - | - | vvi:100254143 | 1048.88 |