Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00553 ATGAAGAATCATCAGGAACACGACGGTGAAGAGGAAGAGGAGGAGAGGACCATGGCGGGAGACGGGGAGGAGGAGGTCGGAGATGTTGGAGAGGTGGGCTCGAGCTTGACAATGGAGAGGGTAGCTGCAGCAAAGCAATTTATCGAGAATCACTATAAAGCTCAGAAAAAACACATTCGAGAACGAAAAGAAAGGCGCTCTGTGTTGGAAAGGAAGTTGGCATCTTCTGATGCATCAGAAGAGGAACAAATTAATCTTTTGAAAGATTTGGAGCGTAAAGAAACTGACTATATGCGACTCAAAAGACATAAAATCTGTGTCGATGACTTTGATCTACTAACAATTATCGGACGAGGAGCCTTCGGAGAGGTAAGACTCTGCAGGGACAAGAAATCAGGCAACATTTACGCCATGAAAAAGTTGAAGAAATCGGAAATGCTCAGCAGAGGACAGGTTGAACATGTCAGAGCTGAAAGGAATTTACTTGCTGAAGTTGCCAGCCACTGCATTGTTAAACTCTATTATTCCTTTCAAGACGCTGAATATTTATATCTAATTATGGAGTATCTACCTGGTGGTGATATGATGACTTTGCTGATCAGAGAGGAAACTTTGACCGAAATTGTCGCTAAATTTTACATCGCTCAAAGTGTTCTTGCAATCGAGTCTATTCATAAGCATAATTACATTCATAGAGACATAAAACCCGACAATCTTCTTCTAGACAAAAATGGTCATATGAAACTCTCTGATTTTGGTCTCTGCAAACCTCTTGACTGCTCAAATTTATCCTCGATAAATGAACACGAAGTTCTAGATGATAAGAACTTGAATGAAACTATGGACGTCGATGAATCCTCTCCGGCTACTGTAAGTGGAAGACGTTGGAAGAGTCCTCTCGAACAACTTCAGCACTGGCAGATCAACAGGAGGAAACTGGCGTATTCCACTGTTGGCACTCCCGATTATATAGCTCCGGAAGTATTGCTGAAGAAAGGATATGGCATGGAGTGTGACTGGTGGTCGCTTGGTGCAATACTGTATGAGATGCTTGTTGGTTATCCTCCATTTTATGCCGATGATCCAGTAACAACCTGCAGGAAGATTGTGCATTGGAGGAATCACTTGAAATTTCCTAATGAAACAAGGCTTTCGCCTGAAGTGAAGGATCTAATATCGAGGCTTCTCTGTGATGTTGAGCACAGACTTGGTACGGGAGGAGCTGATCGAATCAAAGCTCACCCTTGGTTCAAAGATGTTGTGTGGGACAAACTCTATGAAATGGAGGCAGCTTTTAAACCCGAGGTCAACGGGGAACTTGACACTCAAAATTTTATGAAGTTCGATGAGGTGGAACAAGCAACCACTAGAGCTGGATCGGGACCAATGAGGAAGATGCTGTTGACTCCAAAGGATCTAAGTTTTGTTGGCTACACATACAAGAATTTCGAGGCAGTCAAAGGAGTTCTCCGCTCGTTAGGTACGGACTTCATCCAATCATCCCATTTTTTAAGCGTCTTGCGTTCCACTCGTCTCGTCTATTTCTTTATGAAAATGCGACGCTTTTAA 1569 42.96 MKNHQEHDGEEEEEERTMAGDGEEEVGDVGEVGSSLTMERVAAAKQFIENHYKAQKKHIRERKERRSVLERKLASSDASEEEQINLLKDLERKETDYMRLKRHKICVDDFDLLTIIGRGAFGEVRLCRDKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLIREETLTEIVAKFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINEHEVLDDKNLNETMDVDESSPATVSGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFYADDPVTTCRKIVHWRNHLKFPNETRLSPEVKDLISRLLCDVEHRLGTGGADRIKAHPWFKDVVWDKLYEMEAAFKPEVNGELDTQNFMKFDEVEQATTRAGSGPMRKMLLTPKDLSFVGYTYKNFEAVKGVLRSLGTDFIQSSHFLSVLRSTRLVYFFMKMRRF 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7524914 7528944 + Bma025371.1 Bma07g00553 85690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00553 522 Gene3D Phosphorylase Kinase; domain 1 436 446 - -
Bma07g00553 522 SMART serkin_6 110 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00553 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 497 - -
Bma07g00553 522 ProSiteProfiles AGC-kinase C-terminal domain profile. 418 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma07g00553 522 Pfam Protein kinase domain 112 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00553 522 Pfam Protein kinase domain 308 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00553 522 SUPERFAMILY Protein kinase-like (PK-like) 107 456 IPR011009 -
Bma07g00553 522 MobiDBLite consensus disorder prediction 1 35 - -
Bma07g00553 522 SMART pkinase_C_6 418 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bma07g00553 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Bma07g00553 522 CDD STKc_NDR_like 108 481 - -
Bma07g00553 522 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Bma07g00553 522 Gene3D Phosphorylase Kinase; domain 1 73 193 - -
Bma07g00553 522 MobiDBLite consensus disorder prediction 12 28 - -
Bma07g00553 522 ProSiteProfiles Protein kinase domain profile. 110 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00553 522 Gene3D Transferase(Phosphotransferase) domain 1 194 261 - -
Bma07g00553 522 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 28 497 - -
Bma07g00553 522 Gene3D Transferase(Phosphotransferase) domain 1 316 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02206 Bma-Chr1:78977697 Bma07g00553 Bma-Chr7:7524914 0 dispersed
Bma07g00553 Bma-Chr7:7524914 Bma11g00453 Bma-Chr11:5298690 0 dispersed
Bma07g00553 Bma-Chr7:7524914 Bma09g00765 Bma-Chr9:46175670 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66603 PF00069 Pkinase 1.40E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00553 K08790 - csv:101208238 851.662