Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma07g00554 | AACAAAACAAACTTATGTTTACAGGCTGCCCCAGTAAATATTGTTGTAGGTTCTCATGTCTGGGTAGAAGATCCAAAGCTAGCATGGATAGATGGTGAGGTTTTTCGAATCAATGGAGAAGAACTTCATGTTCGTGCCACTAATGGAAAAACGGTCGTCACAAATATCTCAAAAGTGTTTCCTAAGGACACTGAAGCTCCTCCTGGTGGTGTAGATGACATGACAAAGTTATCATATTTACACGAACCTGGTGTTTTGTGTAACTTGGCAGCTAGATATGAACTTAATGAAATCTATACATACACAGGAAATATTTTGATCGCTATAAATCCATTTCAAAGATTGCCTCATCTCTATGATACTCACATGATGCAACAGTATAAAGGAGCTGGACTGGGGGAGCTAAGCCCTCATGTTTTTGCAGTGGCAGATGTTGCTTACAGGGCAATGATAAATGAGGGAAAGAGCAACTCGATTTTGGTTAGTGGAGAGAGTGGTGCCGGTAAGACTGAGACTACAAAAATGCTTATGCGGTATCTTGCTTACCTTGGAGGTCGATCTGGTGTAGAAGGACGAACAGTTGAACAACAAGTTTTAGAATCCAATCCAGTTCTTGAAGCTTTTGGAAATGCAAAAACTGTTAGGAACAACAACTCAAGTCGTTTTGGTAAATTTGTGGAGATACAATTTGACAAAAGTGGGAGGATATCAGGGGCTGCCATAAGAACCTATTTGCTTGAAAGATCTCGAGTTTGTCAAATTTCAGATCCCGAAAGAAATTATCATTGCTTTTACCTTCTTTGTGCTGCCCCTTTAGAGCAAAGGGAGAAATACAAGTTGGGAAACCCTAAGTCATTCCATTACTTAAATCAATCAAACTGCTATGAGCTGGATGGAGTTAATGATGCCCATGAATATCTGGAAACAAGAAGGGCTATGGATGTAGTTGGCATAAGTGAAGAAGAACAAGAGGGAATTTTTAGGGTTGTAGCTGCAATTCTCCATCTTGGGAATGTTGAATTTGCAAAGGGACCGGAGATTGACTCTTCTGTAATTAAGGATGAAAAGTCTAGATTCCACCTTAACACAACATCTGAACTTCTCAAGTGTGATGGGAAGAGTTTGGAAGATGCATTGATTAAACGTGTTATGGTAACACCAGAAGAGATCATTACAAGAACTCTTGATCCTGTTGCTGCATTGGGTAGCAGGGATGCATTGGCTAAAACGATTTATTCACGGTTGTTTGATTGGCTTGTAGATAAAATCAACAATTCAATTGGACAAGACCCAAACTCAAAATCATTGATAGGAGTTCTTGATATTTATGGATTTGAAAGTTTTCAGTTCAACAGCTTTGAGCAGTTCTGTATCAATTTTACGAACGAAAAACTGCAACAACATTTTAATCAGCACGTCTTTAAAATGGAACAGGAAGAATATACAAAAGAAGAGATCAACTGGAGCTATATAGAGTTTGTTGATAATCAGGACGTGTTGGATCTGATTGAAAAGAAACCTGGAGGAATCATCGCACTTTTAGATGAGGCCTGCATGTTTCCAAAATCCACACACGAAACATTTGCGCAGAAGTTATACCAGACATTCAAGAACAACAAACGCTTCATTAAACCTAAGCTTTCACGTACCAGTTTTACCATTTCTCATTATGCTGGAGAGGTAACATATATGGCTGATCTATTTCTCGATAAAAACAAAGACTACGTGGTGGCTGAACATCAGGATCTGTTAACAGCTGCAAAGTGTTCGTTTGTGGCGGGTTTATTTCCTCCTCTCCCTGAAGAATCATCAAAATCGTCAAAATTTTCTTCCATTGGATCACGCTTTAAGTTACAACTTCAGTCTTTGATGGAGACGTTGAGCTCGACAGAACCTCACTACATAAGATGTGTGAAGCCAAACAATGTTCTCAAGCCAGCTATTTTTGAGAATTTGAATATTATTCAACAGTTACGATGTGGTGGTGTTCTTGAAGCCATCAGGATCAGTTGTGCTGGATATCCTACAAGGCGAACATTTTATGAATTCCTTCTCCGCTTTGGAGTTCTTGCTCCAGAAGTTCTGGAAGGGAGCTATGATGACAAGGTAGCATGCCAAATGATTCTGGATAAAATGGGATTAAAAGGTTACCAGGTAGGTAAAACTAAGGTGTTCCTAAGAGCTGGTCAAATGGCTTCTTTGGATGCAAAAAGAATTGAAGTACTTGGAAATGCAGCCAGAATTATTCAAAGACAAATTCGTACATATATTGCCCGCAAAGAATTTGTTGCATTGCGTGAAGCCGCCATTCAATTTCAATCATTTTCTAGAGGTATATTAGCTCGTAAACTATATGAGCAATTGCGAAGGGAAGCAGGAGCTTTAAGAATTCAAAAGAATTTCAGACAATATCGAGCAAGAAAATCTTACCTAAGTCTACGGTCATCTACAATCACCTTACAAACAGGATTGAGAGCGATGACTGCTCGCAATGAATTCAGATTCAGAAAAAGCACGAAGGCTGCAACATTTATGCAGGCTCATCTCCGTCGCCATATCGCATATTCTTATTTTAAAAGCCTCCAAAAGGCTGTGTTATATACCCAGTGTGGATGGAGGCGAAGAGTTGCACGAAGAGAACTTAGAATGCTTAAGATGGCTGCTCGGGAAACTGGAGCGCTTAAAGAAGCAAAGGACAAATTAGAAAAACGTGTGGAAGAACTTACTTGGCGCTTGCAACTCGAGAAGCGATTGCGGACTGATCTGGAAGAGGAAAAAGCCCAAGAAATTTCCAAGTTACGAGATGCTTTGCATGCTATGCAATTTCAAATTGACGACGCAAACGCTAGGGTTATCCAGGAGAGAGAGGCAGCTCGGAAAGCTATGGAAGATGCACCTCCAGTCATCAAGGAGACTCCTGTTGTTGTCGAGGACACAAAAAAAGTTAGTTTGTTGCTGGCTGAGGTTGAGAGCCTTAAGGCTTCGCTGCTATCAGAAAGAAATTCAACGGAAGAGGCCAGGAAATCGAGTGCAAATGCTGATGCTAGAAACACAGAGCTATTAAAAAAACTAGAAAATGCTGAACAAAAGGTTGATCAGCTTCAGGAATCTGTGCAAAGGCTAGAAGAGAAACTTTCAAATTCAGAGTCAGAGAACCAAGTTCTTCGTCAGCAGGCGCTGACTATGTCACCCACTGGGAAAAGTTTGTCTTCAAGACCAAAGTCAATGATAAGGACACCAGAGAATGGGAATATCCTACCTGGAGAACCCAAGGTTGCATCGGATATGACTCTTGCTCTTTCCAATGCACGTGAACCTGATTCAGAGGAAAGACCACAGAAATCTCTCAATGAAAAACAGCAGGAGAATCAGGACTTGTTAATCAAGTGCGTGTCACAAGATTTAGGATTCTCCGGGGGCAAACCAGTTGCTGCTTGTGTTATATATAAATGCCTTCTACACTGGAGGTCGTTTGAAGTTGAGAGGACTAGCATTTTTGATAGGATCATTCAAACAATAGCTTCGGCAATAGAGGTCCAAGATAACAATGATCTATTAGCTTATTGGTTATCTAATGCATCCACTTTACTATTGCTGCTCCAACACACACTTAAAGCAAGCGGAGCAGCAAGCATGACACCTCAAAGGCGGCGAACAACATCAGCTTCTATTTTTGGAAGGATGTCCCAGGGGTTACGGGCATCACCTCAAAGTGCTGGACTCTCATTTCTCAATGGTAGAGGACTTGGTGGTAGACTGGAGGATTTTCGACAGGTTGAGGCTAAGTATCCTGCACTATTATTCAAGCAGCAGCTCACTGCATTCCTTGAGAAGATATATGGAATGATGAGAGATAATTTAAAGAAAGAAATCTCGCCATTACTCGCACTATGTATTAAGGCACCCAGGACATCACGAACAAGTTTGGTTAAAGGACGTTCTCAAGCTAATGCAGCTGCTCAGCAAGCTTTGATTGCCCATTGGCAAAGCATTGTAAAAAGCTTAAACAATTATTTGAAGATGATGAAATCCAACTACGTACCCCCATTCCTAGTCCGGAAAGTTTTTACTCAGATATTCTCATTCATTAATGTTCAGCTATTCAACAGTCTTCTTTTGAGACGGGAGTGCTGTTCATTCAGTAATGGAGAGTATGTGAAAGCCGGTTTGGGAGAATTAGAACAATGGTGCTATGAGGCAACTGAGGAATATGCAGGATCGGTCTGGGATGAGTTGAAGCACATTAGACAAGCTGTTGGATTCCTAGTTATACATCAGAAACCAAAGAAATCTTTGATTGAAATAACGAAAGAATTATGTCCAGTGCTTAGCATTCAACAGTTGTATAGGATCAGCACAATGTACTGGGATGATAAGTATGGTACTCACAGTGTGTCTTCAGAAATTATTTCTAGTATGAGAGTTATGATGACTGAAGAATCAAATCCTGCCGTTAGCAGTTCTTTCCTATTGGACGATGACTCGAGTATCCCATTTTCAGTTGATGACTTTTCGAAGTCGATGGAAAAGGTTGACACAGGTGATATTGATCCTCCTCCATTGATTAGAGAAAACTCAGGCTTCGTATTCTTACTACAACGCGCTGAATAA | 4611 | 40.53 | NKTNLCLQAAPVNIVVGSHVWVEDPKLAWIDGEVFRINGEELHVRATNGKTVVTNISKVFPKDTEAPPGGVDDMTKLSYLHEPGVLCNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMQQYKGAGLGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPLEQREKYKLGNPKSFHYLNQSNCYELDGVNDAHEYLETRRAMDVVGISEEEQEGIFRVVAAILHLGNVEFAKGPEIDSSVIKDEKSRFHLNTTSELLKCDGKSLEDALIKRVMVTPEEIITRTLDPVAALGSRDALAKTIYSRLFDWLVDKINNSIGQDPNSKSLIGVLDIYGFESFQFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYMADLFLDKNKDYVVAEHQDLLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLLRFGVLAPEVLEGSYDDKVACQMILDKMGLKGYQVGKTKVFLRAGQMASLDAKRIEVLGNAARIIQRQIRTYIARKEFVALREAAIQFQSFSRGILARKLYEQLRREAGALRIQKNFRQYRARKSYLSLRSSTITLQTGLRAMTARNEFRFRKSTKAATFMQAHLRRHIAYSYFKSLQKAVLYTQCGWRRRVARRELRMLKMAARETGALKEAKDKLEKRVEELTWRLQLEKRLRTDLEEEKAQEISKLRDALHAMQFQIDDANARVIQEREAARKAMEDAPPVIKETPVVVEDTKKVSLLLAEVESLKASLLSERNSTEEARKSSANADARNTELLKKLENAEQKVDQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSSRPKSMIRTPENGNILPGEPKVASDMTLALSNAREPDSEERPQKSLNEKQQENQDLLIKCVSQDLGFSGGKPVAACVIYKCLLHWRSFEVERTSIFDRIIQTIASAIEVQDNNDLLAYWLSNASTLLLLLQHTLKASGAASMTPQRRRTTSASIFGRMSQGLRASPQSAGLSFLNGRGLGGRLEDFRQVEAKYPALLFKQQLTAFLEKIYGMMRDNLKKEISPLLALCIKAPRTSRTSLVKGRSQANAAAQQALIAHWQSIVKSLNNYLKMMKSNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLGELEQWCYEATEEYAGSVWDELKHIRQAVGFLVIHQKPKKSLIEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEIISSMRVMMTEESNPAVSSSFLLDDDSSIPFSVDDFSKSMEKVDTGDIDPPPLIRENSGFVFLLQRAE | 1536 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7539438 | 7553992 | + | Bma025372.1 | Bma07g00554 | 85691 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma07g00554 | 1536 | SMART | DIL_2 | 1354 | 1461 | IPR002710 | - | |
| Bma07g00554 | 1536 | CDD | MyosinXI_CBD | 1118 | 1502 | IPR037975 | GO:0007015 | |
| Bma07g00554 | 1536 | Gene3D | - | 259 | 317 | - | - | |
| Bma07g00554 | 1536 | PRINTS | Myosin heavy chain signature | 203 | 230 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | PRINTS | Myosin heavy chain signature | 99 | 118 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | PRINTS | Myosin heavy chain signature | 156 | 181 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | PRINTS | Myosin heavy chain signature | 489 | 517 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | PRINTS | Myosin heavy chain signature | 436 | 464 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | ProSiteProfiles | IQ motif profile. | 813 | 842 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SMART | MYSc_2a | 63 | 740 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | Pfam | IQ calmodulin-binding motif | 744 | 762 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | Pfam | IQ calmodulin-binding motif | 766 | 785 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | Pfam | IQ calmodulin-binding motif | 793 | 810 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 15 | 64 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 319 | 608 | - | - | |
| Bma07g00554 | 1536 | Gene3D | - | 446 | 630 | - | - | |
| Bma07g00554 | 1536 | ProSiteProfiles | Myosin motor domain profile. | 69 | 739 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | Pfam | Myosin head (motor domain) | 71 | 727 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | ProSiteProfiles | IQ motif profile. | 765 | 794 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | Coils | Coil | 986 | 1006 | - | - | |
| Bma07g00554 | 1536 | PANTHER | MYOSIN-5 | 13 | 1533 | - | - | |
| Bma07g00554 | 1536 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 42 | 792 | IPR027417 | - | |
| Bma07g00554 | 1536 | Coils | Coil | 884 | 925 | - | - | |
| Bma07g00554 | 1536 | Pfam | DIL domain | 1355 | 1458 | IPR002710 | - | |
| Bma07g00554 | 1536 | ProSiteProfiles | Dilute domain profile. | 1167 | 1479 | IPR002710 | - | |
| Bma07g00554 | 1536 | MobiDBLite | consensus disorder prediction | 1050 | 1078 | - | - | |
| Bma07g00554 | 1536 | ProSiteProfiles | IQ motif profile. | 744 | 771 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | MobiDBLite | consensus disorder prediction | 1041 | 1091 | - | - | |
| Bma07g00554 | 1536 | CDD | MYSc_Myo11 | 83 | 727 | IPR036018 | - | |
| Bma07g00554 | 1536 | PANTHER | MYOSIN | 13 | 1533 | - | - | |
| Bma07g00554 | 1536 | ProSiteProfiles | IQ motif profile. | 838 | 865 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | Coils | Coil | 930 | 964 | - | - | |
| Bma07g00554 | 1536 | Gene3D | Kinesin motor domain | 72 | 669 | IPR036961 | - | |
| Bma07g00554 | 1536 | Pfam | Myosin N-terminal SH3-like domain | 17 | 58 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Bma07g00554 | 1536 | SMART | iq_5 | 837 | 859 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SMART | iq_5 | 789 | 811 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SMART | iq_5 | 741 | 763 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SMART | iq_5 | 860 | 882 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SMART | iq_5 | 812 | 834 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SMART | iq_5 | 764 | 786 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | Gene3D | - | 742 | 792 | - | - | |
| Bma07g00554 | 1536 | Gene3D | - | 840 | 889 | - | - | |
| Bma07g00554 | 1536 | Gene3D | - | 793 | 839 | - | - | |
| Bma07g00554 | 1536 | Coils | Coil | 1010 | 1058 | - | - | |
| Bma07g00554 | 1536 | Gene3D | - | 674 | 737 | - | - | |
| Bma07g00554 | 1536 | ProSiteProfiles | IQ motif profile. | 790 | 819 | IPR000048 | GO:0005515 | |
| Bma07g00554 | 1536 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 794 | 890 | IPR027417 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g00910 | Bma-Chr1:8809128 | Bma07g00554 | Bma-Chr7:7539438 | 4.24E-136 | dispersed | |
| Bma02g00335 | Bma-Chr2:4740102 | Bma07g00554 | Bma-Chr7:7539438 | 0 | dispersed | |
| Bma02g00549 | Bma-Chr2:11098431 | Bma07g00554 | Bma-Chr7:7539438 | 0 | dispersed | |
| Bma07g00554 | Bma-Chr7:7539438 | Bma09g00494 | Bma-Chr9:40977153 | 0 | dispersed | |
| Bma07g00554 | Bma-Chr7:7539438 | Bma09g00523 | Bma-Chr9:41799897 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma07g00554 | K10357 | - | zju:107424106 | 2641.68 |