Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00561 ATGAGCGGTAGCAGTAGCAGATTTCCATTTACAGTAGCTCAGTGGCACGAGCTTGAACTCCAAGCTCTGATTTTTAAGTACATGGTTTCAGGCATTCCTATTCCTCCCGATCTCCTCTTCAGCATCAAAAGAAATAGCTTTGATTCCCATCTCTTCCCTCGCCATGTCCAACCGCAGCAAGTGGGATGGAACTATTTAAACATGGGTCTGGGGAAAAAAATAGACCCAGAGCCTGGGCGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCCAAATACTGCGAGAGACACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGCGGAAGTTAGTTTCAAAAGCACAGCGGGCCTGGAATCAAACCTTTCGCCGTCACCAATCCCCTCCTCCATGCCCAAGAACCCATTTTCTCTCTCTACAAATCCTCACTCTCTCTCCTCTGATACCCTGCACCACTACCCCCAGGTTCACCATTCTTCGTGCTTCAATAACATCCTTCTTTCGTCTTCTTCTCTCCTGGACTCCTGCTCTTACTCCCAGCCTGCAACAGATTTGAGGTCAAAATTTAGTACACTTTGA 606 47.52 MSGSSSRFPFTVAQWHELELQALIFKYMVSGIPIPPDLLFSIKRNSFDSHLFPRHVQPQQVGWNYLNMGLGKKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPAEVSFKSTAGLESNLSPSPIPSSMPKNPFSLSTNPHSLSSDTLHHYPQVHHSSCFNNILLSSSSLLDSCSYSQPATDLRSKFSTL 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7643668 7644343 - Bma025380.2 Bma07g00561 85698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00561 201 PANTHER - 2 190 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bma07g00561 201 PANTHER GROWTH-REGULATING FACTOR 5 2 190 - -
Bma07g00561 201 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bma07g00561 201 MobiDBLite consensus disorder prediction 126 151 - -
Bma07g00561 201 Pfam WRC 76 117 IPR014977 -
Bma07g00561 201 ProSiteProfiles WRC domain profile. 75 119 IPR014977 -
Bma07g00561 201 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bma07g00561 201 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00561 Bma11g00608 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00561 Bma-Chr7:7643668 Bma08g00146 Bma-Chr8:1877472 6.96E-50 dispersed
Bma13g00632 Bma-Chr13:15164677 Bma07g00561 Bma-Chr7:7643668 3.89E-07 transposed
Bma11g00608 Bma-Chr11:9050905 Bma07g00561 Bma-Chr7:7643668 4.92E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57617 PF08879 WRC 7.90E-21 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00561 - - cpap:110817634 218.394