Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma07g00574 | ATGAGAACTGAAGTTGCAGAACCTGTTCACAAACCCGAGTCGTTGGGATCCAGATTGACAGCATATGAGTTGGTGCATGAAAAAATACCTGCCACTCTCGTTGCAGATTCTGCTGCAGCTGCACTTATGCAACTAGGACGTGTGAATGCTGTCATTGTCGGAGCAGATCGTGTGGCTGCCAATGGTGATACGGCTAACAAGATTGGAACTTACAATCTGGCCTTGAGTGCAATGTATCACAAGGTCCCATTTTATGTGGCAGCCCCATTGACTTCTGTAGATTTATCCCTTTCTTCTGGCCAAGAGATCGTCATTGAAGAACGGTCGCCTAAAGAGTTATTGCACACCCGGGGCGGTCTTGGGGAGCAAGTTGCAGCTTCTGGAATCTCGGTTTGGAATCCGGCATTCGATGTTACCCCAGCTTCTCTCATATCAGGGATCATAACAGAAAAGGGGGTGATCACCAAGGAGAGAGGTGATGGTTTCAACATTAAGGGATTCGTCGAGCAGAGAGGTGGGCAGGCCGGTGTCTAG | 534 | 48.88 | MRTEVAEPVHKPESLGSRLTAYELVHEKIPATLVADSAAAALMQLGRVNAVIVGADRVAANGDTANKIGTYNLALSAMYHKVPFYVAAPLTSVDLSLSSGQEIVIEERSPKELLHTRGGLGEQVAASGISVWNPAFDVTPASLISGIITEKGVITKERGDGFNIKGFVEQRGGQAGV | 177 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 8005725 | 8007598 | - | Bma031366 | Bma07g00574 | 85711 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma07g00574 | 177 | PANTHER | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE | 12 | 168 | - | - | |
| Bma07g00574 | 177 | Pfam | Initiation factor 2 subunit family | 11 | 155 | IPR000649 | GO:0044237 | |
| Bma07g00574 | 177 | Gene3D | - | 5 | 164 | IPR042529 | - | |
| Bma07g00574 | 177 | PANTHER | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE | 12 | 168 | - | - | |
| Bma07g00574 | 177 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 12 | 157 | IPR037171 | - | |
| Bma07g00574 | 177 | TIGRFAM | eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins | 11 | 156 | IPR011559 | GO:0044249 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g00403 | Bma-Chr1:3357723 | Bma07g00574 | Bma-Chr7:8005725 | 1.25E-14 | dispersed | |
| Bma07g00574 | Bma-Chr7:8005725 | Bma09g00997 | Bma-Chr9:49489944 | 5.74E-08 | dispersed | |
| Bma07g00574 | Bma-Chr7:8005725 | Bma06g01038 | Bma-Chr6:47213299 | 8.23E-16 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma07g00574 | K08963 | - | csv:101210526 | 258.455 |