Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00577 ATGGCAACAGTTCAGCTGACTGCATCCCCTATCTCAGCCAGGTACTCTGCTGTGAAGCCTTTGGGTGACAGAGTATTGGTTAAGACAAAAACTGCAGAACAGAAGACCGAAGGAGGTATCCTGCTTCCAACTACAGCTCAGACCAAGCCCCAAGGAGGTGAAGTGTTTGCTGTTGGTGAAGGCAAAATGATCGGAAAGACCAAAGTACATAGTTGTGTTAAGACGGGTGCTCAAGTTGTGTACTCGAAGTATGCTGGGACCGAGTTAGAGTTCGATGGCTCGAAGCATCTTTTCTTGAAGGAGGATGACATTGTCGGTGTTCTAGAAACGGATGATGTGAAGGATCTAAAACCCTTGAACGACGTTGCCGAAGGCGAAGAGAAGACCGCCGGAGGATTGTTGCTGACAGAAGCAACGAAGGAGAAGCCTTCTATTGGCACGGTGATAGCTGTTGGGCCCGGACCACTCGATGAGGAAGGCAACCGAAAACCGCTTCCAATCTCAACCGGCAGCTCGGTGATGTACTCCAAATACTCGGGCAATGACTTCAAAGCCATGGCCGTAGCTGTGCAGCCAGCTGAAGAAGTCTCTACTAAAAAGAAGCCTCTGACCAAACAAAGGCGTGTAGTTGTCACTGGAATGGGTGTTGTGACCCCACTTGGTCATGATCCAGATGTTTTCTACAGTAATTTGCTTGAGGGTACCAGTGGCATAAGTGAGATTGAGACATTTGATTGTGCTCAATTCCCCACTAGAATAGCTGGCGAGATTAAATCGTTCTCTACCGATGGTTGGATTGCACCAAAACTTTCCAAGAGGATGGACAAGTTCATGCTATACATGCTTACTGCTGGAAAGAAAGCACTTGCAGATGGTGGAATTACAGAAGACGTAATGAGTGAGTTGGATAAAACTAAATGTGGAGTGTTGATTGGTTCAGCAATGGGTGGCATGAAGGTAACCCAACTGTCTTTAACTGATGCAATTGAAGCTCTACGGATTTCATATAAGAAAATGAATCCTTTCTGTGTGCCATTTGGATGGATGGGTCCAAACTACTCAATTTCAACTGCTTGTGCGACAAGTAACTTCTGTATATTAAATGCAGCAAATCATATAATTAGAGGCGAAGCTGATATCATGCTTTGTGGTGGCTCAGATGCAGTAATTATCCCTATTGGCTTGGGGGGTTTTGTTGCTTGCAGAGCACTTTCACAGAGGAACAATGATCCCACCAAAGCTTCACGTCCTTGGGATTCGAATTATTTTTTCATTGACCAGAATCGGGATGGATTTGTAATGGGGGAAGGAGCTGGTGTTTTGCTTCTAGAAGAATTAGAGCACGCTAAGCTACTTCTTTTAACGCAGAAAAGAGGAGCAGAAATCTATGCTGAATTTCTTGGCGGCAGCTTCACTTGCGATGCTTATCATATGACAGAACCTCACCCAGAGGGGGTTGGCGTTATTCTTTGCATAGAAAAAGCATTAGCTCAGTCTGGGGTATCTAAGACCGATGTGAATTACATAAACGCACATGCCACGTCCACCCCAGCTGGAGACCTGAAAGAATATCAAGCTCTTATTCATTGCTTTGGAAAGAATAATCTCCTAGTCAACTCCACTAAGTCCATGATTGGTCACCTCCTAGGAGCATCAGGTGCTGTTGAAGCTGTTGCAACAGTGCAGGCAATACGGACAGGATGGATTCATCCCAATATCAACCTAGAAAGCCCGGACAAAGGCGTGGATGCTAACGTGCTAGTGGGTTCAAAGAAAGAAAGACTAAACGTGAATGTTGCATTGTCTAACTCGTTTGGGTTTGGTGGTCACAACTCATCCATTATATTTGCTCCTTACAAGTAA 1863 45.2 MATVQLTASPISARYSAVKPLGDRVLVKTKTAEQKTEGGILLPTTAQTKPQGGEVFAVGEGKMIGKTKVHSCVKTGAQVVYSKYAGTELEFDGSKHLFLKEDDIVGVLETDDVKDLKPLNDVAEGEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKPLPISTGSSVMYSKYSGNDFKAMAVAVQPAEEVSTKKKPLTKQRRVVVTGMGVVTPLGHDPDVFYSNLLEGTSGISEIETFDCAQFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVMSELDKTKCGVLIGSAMGGMKVTQLSLTDAIEALRISYKKMNPFCVPFGWMGPNYSISTACATSNFCILNAANHIIRGEADIMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDSNYFFIDQNRDGFVMGEGAGVLLLEELEHAKLLLLTQKRGAEIYAEFLGGSFTCDAYHMTEPHPEGVGVILCIEKALAQSGVSKTDVNYINAHATSTPAGDLKEYQALIHCFGKNNLLVNSTKSMIGHLLGASGAVEAVATVQAIRTGWIHPNINLESPDKGVDANVLVGSKKERLNVNVALSNSFGFGGHNSSIIFAPYK 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8136672 8146165 + Bma025400.1 Bma07g00577 85714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00577 620 CDD KAS_I_II 219 616 IPR000794 -
Bma07g00577 620 SUPERFAMILY GroES-like 115 184 IPR011032 -
Bma07g00577 620 CDD cpn10 18 108 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 Gene3D GroES chaperonin 117 186 IPR037124 GO:0006457
Bma07g00577 620 Pfam Beta-ketoacyl synthase, C-terminal domain 463 576 IPR014031 -
Bma07g00577 620 ProSitePatterns Chaperonins cpn10 signature. 18 42 IPR018369 GO:0005524|GO:0006457
Bma07g00577 620 Hamap Co-chaperonin GroES [groES]. 17 109 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 SUPERFAMILY Thiolase-like 420 618 IPR016039 GO:0016746
Bma07g00577 620 SUPERFAMILY Thiolase-like 207 450 IPR016039 GO:0016746
Bma07g00577 620 Pfam Chaperonin 10 Kd subunit 18 107 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 Pfam Chaperonin 10 Kd subunit 123 185 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 SMART Beta-ketoacyl synthase 209 619 IPR020841 -
Bma07g00577 620 Gene3D - 187 620 IPR016039 GO:0016746
Bma07g00577 620 PRINTS 10kDa chaperonin signature 74 86 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 PRINTS 10kDa chaperonin signature 95 108 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 PRINTS 10kDa chaperonin signature 40 61 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 PRINTS 10kDa chaperonin signature 18 33 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 SUPERFAMILY GroES-like 17 109 IPR011032 -
Bma07g00577 620 ProSitePatterns Beta-ketoacyl synthases active site. 350 366 IPR018201 GO:0004315|GO:0006633
Bma07g00577 620 PANTHER 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE II, CHLOROPLASTIC 162 620 - -
Bma07g00577 620 Gene3D GroES chaperonin 11 116 IPR037124 GO:0006457
Bma07g00577 620 PANTHER POLYKETIDE SYNTHASE-RELATED 162 620 IPR000794 -
Bma07g00577 620 SMART Cpn10_2 17 108 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 SMART Cpn10_2 115 189 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma07g00577 620 Pfam Beta-ketoacyl synthase, N-terminal domain 207 449 IPR014030 -
Bma07g00577 620 CDD cpn10 116 184 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00577 Bma11g00619 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00577 Bma-Chr7:8136672 Bma14g00937 Bma-Chr14:10690941 6.21E-158 dispersed
Bma05g01313 Bma-Chr5:52378113 Bma07g00577 Bma-Chr7:8136672 1.34E-06 transposed
Bma06g01010 Bma-Chr6:46646482 Bma07g00577 Bma-Chr7:8136672 0 transposed
Bma11g00620 Bma-Chr11:9721417 Bma07g00577 Bma-Chr7:8136672 0 transposed
Bma11g00619 Bma-Chr11:9417553 Bma07g00577 Bma-Chr7:8136672 6.80E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00577 K09458 - tcc:18588235 717.998