Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00577 | ATGGCAACAGTTCAGCTGACTGCATCCCCTATCTCAGCCAGGTACTCTGCTGTGAAGCCTTTGGGTGACAGAGTATTGGTTAAGACAAAAACTGCAGAACAGAAGACCGAAGGAGGTATCCTGCTTCCAACTACAGCTCAGACCAAGCCCCAAGGAGGTGAAGTGTTTGCTGTTGGTGAAGGCAAAATGATCGGAAAGACCAAAGTACATAGTTGTGTTAAGACGGGTGCTCAAGTTGTGTACTCGAAGTATGCTGGGACCGAGTTAGAGTTCGATGGCTCGAAGCATCTTTTCTTGAAGGAGGATGACATTGTCGGTGTTCTAGAAACGGATGATGTGAAGGATCTAAAACCCTTGAACGACGTTGCCGAAGGCGAAGAGAAGACCGCCGGAGGATTGTTGCTGACAGAAGCAACGAAGGAGAAGCCTTCTATTGGCACGGTGATAGCTGTTGGGCCCGGACCACTCGATGAGGAAGGCAACCGAAAACCGCTTCCAATCTCAACCGGCAGCTCGGTGATGTACTCCAAATACTCGGGCAATGACTTCAAAGCCATGGCCGTAGCTGTGCAGCCAGCTGAAGAAGTCTCTACTAAAAAGAAGCCTCTGACCAAACAAAGGCGTGTAGTTGTCACTGGAATGGGTGTTGTGACCCCACTTGGTCATGATCCAGATGTTTTCTACAGTAATTTGCTTGAGGGTACCAGTGGCATAAGTGAGATTGAGACATTTGATTGTGCTCAATTCCCCACTAGAATAGCTGGCGAGATTAAATCGTTCTCTACCGATGGTTGGATTGCACCAAAACTTTCCAAGAGGATGGACAAGTTCATGCTATACATGCTTACTGCTGGAAAGAAAGCACTTGCAGATGGTGGAATTACAGAAGACGTAATGAGTGAGTTGGATAAAACTAAATGTGGAGTGTTGATTGGTTCAGCAATGGGTGGCATGAAGGTAACCCAACTGTCTTTAACTGATGCAATTGAAGCTCTACGGATTTCATATAAGAAAATGAATCCTTTCTGTGTGCCATTTGGATGGATGGGTCCAAACTACTCAATTTCAACTGCTTGTGCGACAAGTAACTTCTGTATATTAAATGCAGCAAATCATATAATTAGAGGCGAAGCTGATATCATGCTTTGTGGTGGCTCAGATGCAGTAATTATCCCTATTGGCTTGGGGGGTTTTGTTGCTTGCAGAGCACTTTCACAGAGGAACAATGATCCCACCAAAGCTTCACGTCCTTGGGATTCGAATTATTTTTTCATTGACCAGAATCGGGATGGATTTGTAATGGGGGAAGGAGCTGGTGTTTTGCTTCTAGAAGAATTAGAGCACGCTAAGCTACTTCTTTTAACGCAGAAAAGAGGAGCAGAAATCTATGCTGAATTTCTTGGCGGCAGCTTCACTTGCGATGCTTATCATATGACAGAACCTCACCCAGAGGGGGTTGGCGTTATTCTTTGCATAGAAAAAGCATTAGCTCAGTCTGGGGTATCTAAGACCGATGTGAATTACATAAACGCACATGCCACGTCCACCCCAGCTGGAGACCTGAAAGAATATCAAGCTCTTATTCATTGCTTTGGAAAGAATAATCTCCTAGTCAACTCCACTAAGTCCATGATTGGTCACCTCCTAGGAGCATCAGGTGCTGTTGAAGCTGTTGCAACAGTGCAGGCAATACGGACAGGATGGATTCATCCCAATATCAACCTAGAAAGCCCGGACAAAGGCGTGGATGCTAACGTGCTAGTGGGTTCAAAGAAAGAAAGACTAAACGTGAATGTTGCATTGTCTAACTCGTTTGGGTTTGGTGGTCACAACTCATCCATTATATTTGCTCCTTACAAGTAA | 1863 | 45.2 | MATVQLTASPISARYSAVKPLGDRVLVKTKTAEQKTEGGILLPTTAQTKPQGGEVFAVGEGKMIGKTKVHSCVKTGAQVVYSKYAGTELEFDGSKHLFLKEDDIVGVLETDDVKDLKPLNDVAEGEEKTAGGLLLTEATKEKPSIGTVIAVGPGPLDEEGNRKPLPISTGSSVMYSKYSGNDFKAMAVAVQPAEEVSTKKKPLTKQRRVVVTGMGVVTPLGHDPDVFYSNLLEGTSGISEIETFDCAQFPTRIAGEIKSFSTDGWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVMSELDKTKCGVLIGSAMGGMKVTQLSLTDAIEALRISYKKMNPFCVPFGWMGPNYSISTACATSNFCILNAANHIIRGEADIMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDSNYFFIDQNRDGFVMGEGAGVLLLEELEHAKLLLLTQKRGAEIYAEFLGGSFTCDAYHMTEPHPEGVGVILCIEKALAQSGVSKTDVNYINAHATSTPAGDLKEYQALIHCFGKNNLLVNSTKSMIGHLLGASGAVEAVATVQAIRTGWIHPNINLESPDKGVDANVLVGSKKERLNVNVALSNSFGFGGHNSSIIFAPYK | 620 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 8136672 | 8146165 | + | Bma025400.1 | Bma07g00577 | 85714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00577 | 620 | CDD | KAS_I_II | 219 | 616 | IPR000794 | - | |
Bma07g00577 | 620 | SUPERFAMILY | GroES-like | 115 | 184 | IPR011032 | - | |
Bma07g00577 | 620 | CDD | cpn10 | 18 | 108 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | Gene3D | GroES chaperonin | 117 | 186 | IPR037124 | GO:0006457 | |
Bma07g00577 | 620 | Pfam | Beta-ketoacyl synthase, C-terminal domain | 463 | 576 | IPR014031 | - | |
Bma07g00577 | 620 | ProSitePatterns | Chaperonins cpn10 signature. | 18 | 42 | IPR018369 | GO:0005524|GO:0006457 | |
Bma07g00577 | 620 | Hamap | Co-chaperonin GroES [groES]. | 17 | 109 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | SUPERFAMILY | Thiolase-like | 420 | 618 | IPR016039 | GO:0016746 | |
Bma07g00577 | 620 | SUPERFAMILY | Thiolase-like | 207 | 450 | IPR016039 | GO:0016746 | |
Bma07g00577 | 620 | Pfam | Chaperonin 10 Kd subunit | 18 | 107 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | Pfam | Chaperonin 10 Kd subunit | 123 | 185 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | SMART | Beta-ketoacyl synthase | 209 | 619 | IPR020841 | - | |
Bma07g00577 | 620 | Gene3D | - | 187 | 620 | IPR016039 | GO:0016746 | |
Bma07g00577 | 620 | PRINTS | 10kDa chaperonin signature | 74 | 86 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | PRINTS | 10kDa chaperonin signature | 95 | 108 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | PRINTS | 10kDa chaperonin signature | 40 | 61 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | PRINTS | 10kDa chaperonin signature | 18 | 33 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | SUPERFAMILY | GroES-like | 17 | 109 | IPR011032 | - | |
Bma07g00577 | 620 | ProSitePatterns | Beta-ketoacyl synthases active site. | 350 | 366 | IPR018201 | GO:0004315|GO:0006633 | |
Bma07g00577 | 620 | PANTHER | 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE II, CHLOROPLASTIC | 162 | 620 | - | - | |
Bma07g00577 | 620 | Gene3D | GroES chaperonin | 11 | 116 | IPR037124 | GO:0006457 | |
Bma07g00577 | 620 | PANTHER | POLYKETIDE SYNTHASE-RELATED | 162 | 620 | IPR000794 | - | |
Bma07g00577 | 620 | SMART | Cpn10_2 | 17 | 108 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | SMART | Cpn10_2 | 115 | 189 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma07g00577 | 620 | Pfam | Beta-ketoacyl synthase, N-terminal domain | 207 | 449 | IPR014030 | - | |
Bma07g00577 | 620 | CDD | cpn10 | 116 | 184 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00577 | Bma11g00619 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma07g00577 | Bma-Chr7:8136672 | Bma14g00937 | Bma-Chr14:10690941 | 6.21E-158 | dispersed | |
Bma05g01313 | Bma-Chr5:52378113 | Bma07g00577 | Bma-Chr7:8136672 | 1.34E-06 | transposed | |
Bma06g01010 | Bma-Chr6:46646482 | Bma07g00577 | Bma-Chr7:8136672 | 0 | transposed | |
Bma11g00620 | Bma-Chr11:9721417 | Bma07g00577 | Bma-Chr7:8136672 | 0 | transposed | |
Bma11g00619 | Bma-Chr11:9417553 | Bma07g00577 | Bma-Chr7:8136672 | 6.80E-98 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00577 | K09458 | - | tcc:18588235 | 717.998 |