Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00627 ATGAGTACTAGTCAATCCCGCGCCGGTTCTTCAGGATCGGGATTTTTAAGCAAGATCAGGACTTCCTGTGGTTTAAGTTCCACATCTGGAAACTCTGGAAAAGGTGGAAGTAGGTCATCAATTACAAGAGTGAGATATGGATTTCACTTGATTGAAGGGAAATCGGGTCATAATATGGAGGATTATCATGTTGCTGAATACAAAAGAAAGAAAAATCACGAGCTTGGATTGTTTGCCATATTCGACGGTCACCTTGGGGATCGGGTCCCATACTTTTTGACACAGCATCTCTTCAATAACATACTTGATGAGCCAAATTTCATGATAGACCAAAAGCAGGCAATCAGGAATGCGTATCACTCCACTAATAAGGTTATCTTGGAAAACTCCATGCAATTGGGTCCTGGTGGCTCTACTGCAGTAACTGCAATAGTCATTGATGGCAAAGACTTATGGGTAGCAAACATTGGTGACTCAAGAGCTGTTGTGTGTGAGAGGGGCTCTGCTAATCAACTAACAGTAGACCATGAACCACGCACTGAACGACCAAGGATAGAAAAGCAAGGTGGCTTTGTGATAACGTTACCTGGAGATGTGCCTAGAGTCAATGGTCAACTAGCAGTTGCTCGCGCTTTTGGGGATCAAAATCTAAAAGAACATTTAAGTGCAGATCCCGATGTAAGACATGTTCCTATAGACTCAACGATTGAGTTTGTAATTTTGGCAAGTGACGGATTGTGGAAGGTTATGAATAATCAAGAGGCAGTTGATCTGATCAAAGCCACTAAAGATCCTCGAGCAGCAGCGAAGCAATTAGCAAACGAGGCATTGACCAGAAAAAGTAAAGACGATATATCATGCATTGTGATTCGGTTTGGGTAA 882 42.4 MSTSQSRAGSSGSGFLSKIRTSCGLSSTSGNSGKGGSRSSITRVRYGFHLIEGKSGHNMEDYHVAEYKRKKNHELGLFAIFDGHLGDRVPYFLTQHLFNNILDEPNFMIDQKQAIRNAYHSTNKVILENSMQLGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLTVDHEPRTERPRIEKQGGFVITLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDVRHVPIDSTIEFVILASDGLWKVMNNQEAVDLIKATKDPRAAAKQLANEALTRKSKDDISCIVIRFG 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9974271 9977502 + Bma025467.1 Bma07g00627 85764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00627 293 Gene3D - 39 293 IPR036457 -
Bma07g00627 293 ProSiteProfiles PPM-type phosphatase domain profile. 45 292 IPR001932 -
Bma07g00627 293 Pfam Protein phosphatase 2C 57 285 IPR001932 -
Bma07g00627 293 PANTHER PROTEIN PHOSPHATASE 2C 11 293 IPR015655 GO:0004722|GO:0006470
Bma07g00627 293 SMART PP2C_4 41 290 IPR001932 -
Bma07g00627 293 PANTHER PROTEIN PHOSPHATASE 2C 44-RELATED 11 293 - -
Bma07g00627 293 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Bma07g00627 293 CDD PP2Cc 57 292 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02612 Bma-Chr1:83699069 Bma07g00627 Bma-Chr7:9974271 4.05E-115 transposed
Bma03g00744 Bma-Chr3:6756175 Bma07g00627 Bma-Chr7:9974271 5.68E-110 transposed
Bma05g00569 Bma-Chr5:33234728 Bma07g00627 Bma-Chr7:9974271 3.45E-115 transposed
Bma11g00460 Bma-Chr11:5422978 Bma07g00627 Bma-Chr7:9974271 2.16E-10 transposed
Bma12g00365 Bma-Chr12:6487620 Bma07g00627 Bma-Chr7:9974271 6.55E-112 transposed
Bma14g00227 Bma-Chr14:2774605 Bma07g00627 Bma-Chr7:9974271 3.11E-89 transposed
Bma14g00257 Bma-Chr14:3049750 Bma07g00627 Bma-Chr7:9974271 4.06E-115 transposed
Bma11g00807 Bma-Chr11:24502658 Bma07g00627 Bma-Chr7:9974271 1.02E-156 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00627 K17506 - cpap:110811361 453.366