Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00631 TTCTGTTTGAGTGGAAAAATGTTGGAGGGTAATCCTGAATTCACGGGAATTATTGATCTAAACAACCACGACTATGATTTCTCACAAGGGTTTTATCATAAACTGGACGAGGATACCAACATGTCAATTGATAGTTTTGCAAGCTTGCACGCAAGCAATGGTGGAGGGTCTGTCGCAATGTCTGTAGATAATAACAGTAGTGTTGCATCAAATGAATCCCATACTCGTATTTTGAACCACCCGGGTCTTCGGCGGCGAGCCAATGACAATTACACTGTGCAACAGAGTACTCATAAGGGAAGAGTGACACATGCTTTAAGCGATGATGCACTTGCCCGGGCTCTGTTTGACAGTAGCACCCCTACTCAAGGTCTTGAAAGTTTTGAGGAGTGGACGATCGATTTGAGAAAACTTAATATGGGGGAAGCTTTTGCACAAGGAGCTTTTGGAAAACTTTATCGAGGTACTTACAATGGTGAAGATGTTGCTATCAAAATCTTGGAGAGGCCAGATAATGATAATGACAAGGCTCTGTTGATGGAGCAACAGTTTCAGCAGGAGGTCATCATGTTGGCTACGTTAAAGCATCCAAATATAGTTCGTTTTATTGGTGGCTGTAGCAAGCCAATGCTTTGGTGCATTGTGACTGAATATGCAAAAGGTGGTTCAGTTCGGCAATTCTTAATGAAGCGACAAAGTCGATCAGTTCCTCTTAAACTGGCAGTCAAGCAAGCTTTAGATGTGGCAAGGGGGATGGCATATGTTCATGAGCTTGGACTAATACATCGGGACTTAAAGTCTGACAACTTGTTGATTTCTGCAGATAAATCTATAAAAATTGCTGACTTTGGAGTAGCCCGAATTGAGGTGCAGACTGAAGGAATGACGCCTGAGACTGGCACATACCGCTGGATGGCTCCGGAGATGATACAGCACAGGCCCTACACACAAAAAGTAGATGTGTATAGCTTTGGGATTGTTCTTTGGGAACTCATAACCGGAATGCTTCCGTTCCAAAATATGACGGCTGTACAGGCTGCATTTGCAGTTGTGAACAAGGGTTTTCGTCCTGTCATCCCAAACGATTGCTTGCCTGTTCTCAGCGAGATAATGACGCGCTGCTGGGATGCCAATCCAAATGTTAGACCCCACTTCACTGAGGTGGTCAGAATGCTGGAGCATGCCCAAACTGAGATCATGACAAGCATCCGAAAGGCCCGTTTTAGGTGTTGCATTGCCGAGCCTGTAACTGCCGACTGA 1260 44.76 FCLSGKMLEGNPEFTGIIDLNNHDYDFSQGFYHKLDEDTNMSIDSFASLHASNGGGSVAMSVDNNSSVASNESHTRILNHPGLRRRANDNYTVQQSTHKGRVTHALSDDALARALFDSSTPTQGLESFEEWTIDLRKLNMGEAFAQGAFGKLYRGTYNGEDVAIKILERPDNDNDKALLMEQQFQQEVIMLATLKHPNIVRFIGGCSKPMLWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMAYVHELGLIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGFRPVIPNDCLPVLSEIMTRCWDANPNVRPHFTEVVRMLEHAQTEIMTSIRKARFRCCIAEPVTAD 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10046470 10050726 + Bma025471.1 Bma07g00631 85768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00631 419 SMART serkin_6 138 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00631 419 Pfam Protein tyrosine and serine/threonine kinase 139 392 IPR001245 GO:0004672|GO:0006468
Bma07g00631 419 PRINTS Tyrosine kinase catalytic domain signature 363 385 IPR001245 GO:0004672|GO:0006468
Bma07g00631 419 PRINTS Tyrosine kinase catalytic domain signature 254 272 IPR001245 GO:0004672|GO:0006468
Bma07g00631 419 PRINTS Tyrosine kinase catalytic domain signature 300 310 IPR001245 GO:0004672|GO:0006468
Bma07g00631 419 PRINTS Tyrosine kinase catalytic domain signature 216 229 IPR001245 GO:0004672|GO:0006468
Bma07g00631 419 PRINTS Tyrosine kinase catalytic domain signature 319 341 IPR001245 GO:0004672|GO:0006468
Bma07g00631 419 ProSiteProfiles Protein kinase domain profile. 138 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00631 419 PANTHER SERINE-THREONINE PROTEIN KINASE 8 409 - -
Bma07g00631 419 SUPERFAMILY Protein kinase-like (PK-like) 120 392 IPR011009 -
Bma07g00631 419 Gene3D Phosphorylase Kinase; domain 1 126 220 - -
Bma07g00631 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Bma07g00631 419 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 8 409 - -
Bma07g00631 419 Gene3D Transferase(Phosphotransferase) domain 1 221 411 - -
Bma07g00631 419 CDD STKc_MAP3K-like 145 392 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00830 Bma-Chr2:45203595 Bma07g00631 Bma-Chr7:10046470 4.17E-72 dispersed
Bma07g00631 Bma-Chr7:10046470 Bma03g00620 Bma-Chr3:5114687 1.45E-90 dispersed
Bma07g00631 Bma-Chr7:10046470 Bma07g00633 Bma-Chr7:10067071 2.77E-44 proximal
Bma06g00231 Bma-Chr6:2860740 Bma07g00631 Bma-Chr7:10046470 1.13E-85 transposed
Bma07g00378 Bma-Chr7:4688446 Bma07g00631 Bma-Chr7:10046470 6.31E-92 transposed
Bma10g00355 Bma-Chr10:3339143 Bma07g00631 Bma-Chr7:10046470 7.98E-78 transposed
Bma14g01476 Bma-Chr14:29907285 Bma07g00631 Bma-Chr7:10046470 8.48E-71 transposed
Bma11g00795 Bma-Chr11:23180689 Bma07g00631 Bma-Chr7:10046470 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66606 PF07714 PK_Tyr_Ser-Thr 9.10E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00631 - - csv:101213713 719.924