Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00633 ATGTTGGAGGGTAATCCTGAATTCACGGGAATTATTGATCTAAACAACCACGACTATGATTTCTCACAAGGGTTTTATCATAAACTGGACGAGGATACCAACATGTCAATTGATAGTTTTGCAAGCTTGCACGCAAGCAATGGTGGAGGGTCTGTCGCAATGTCTGTAGATAATAACAGTAGTGTTGCATCAAATGAATCCCATACTCGTATTGCTACGTTAAAGCATCCAAATATAGTTCGTTTTATTGGTGGCTGTAGCAAGCCAATGCTTTGGTGCATTGTGACTGAATATGCAAAAGGTGGTTCAGTTCGGCAATTCTTAATGAAGCGACAAAGTCGATCAGTTCCTCTTAAACTGGCAGTCAAGCAAGCTTTAGATGTGGCAAGGGGGATGGCATATGTTCATGAGCTTGGACTAATACATCGGGACTTAAAGTCTGACAACTTGTTGATTTCTGCAGATAAATCTATAAAAATTGCTGACTTTGGAGTAGCCCGAATTGAGGTGCAGACTGAAGGAATGACGCCTGAGACTGGCACATACCGCTGGATGGCTCCGGAGATGATACAGCACAGGCCCTACACACAAAAAGTAGATGTGTATAGCTTTGGGATTGTTCTTTGGGAACTCATAACCGGAATGCTTCCGTTCCAAAATATGACGGCTGTACAGGCTGCATTTGCAGTTGTGAACAAGGGTTTTCGTCCTGTCATCCCAAACGATTGCTTGCCTGTTCTCAGCGAGATAATGACGCGCTGCTGGGATGCCAATCCAAATGTTAGACCCCACTTCACTGAGGTGGTCAGAATGCTGGAGCATGCCCAAACTGAGATCATGACAAGCATCCGAAAGGCCCGTTTTAGGTGTTGCATTGCCGAGCCTGTAACTGCCGACTGA 900 44.78 MLEGNPEFTGIIDLNNHDYDFSQGFYHKLDEDTNMSIDSFASLHASNGGGSVAMSVDNNSSVASNESHTRIATLKHPNIVRFIGGCSKPMLWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMAYVHELGLIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGFRPVIPNDCLPVLSEIMTRCWDANPNVRPHFTEVVRMLEHAQTEIMTSIRKARFRCCIAEPVTAD 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10067071 10071306 - Bma025473.1 Bma07g00633 85770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00633 299 Pfam Protein tyrosine and serine/threonine kinase 68 272 IPR001245 GO:0004672|GO:0006468
Bma07g00633 299 Gene3D Transferase(Phosphotransferase) domain 1 43 292 - -
Bma07g00633 299 PRINTS Tyrosine kinase catalytic domain signature 199 221 IPR001245 GO:0004672|GO:0006468
Bma07g00633 299 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Bma07g00633 299 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Bma07g00633 299 PRINTS Tyrosine kinase catalytic domain signature 180 190 IPR001245 GO:0004672|GO:0006468
Bma07g00633 299 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Bma07g00633 299 SUPERFAMILY Protein kinase-like (PK-like) 71 272 IPR011009 -
Bma07g00633 299 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 71 - -
Bma07g00633 299 PANTHER SERINE-THREONINE PROTEIN KINASE 2 71 - -
Bma07g00633 299 CDD STKc_MAP3K-like 71 272 - -
Bma07g00633 299 ProSiteProfiles Protein kinase domain profile. 29 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00633 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Bma07g00633 299 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 71 289 - -
Bma07g00633 299 PANTHER SERINE-THREONINE PROTEIN KINASE 71 289 - -
Bma07g00633 299 SMART serkin_6 39 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00633 Bma11g00795 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00633 Bma-Chr7:10067071 Bma11g00795 Bma-Chr11:23180689 1.06E-38 dispersed
Bma07g00631 Bma-Chr7:10046470 Bma07g00633 Bma-Chr7:10067071 2.77E-44 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66607 PF07714 PK_Tyr_Ser-Thr 6.70E-59 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00633 - - mnt:21407879 437.958