Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00657 ATGTCGATTGAGAAGAAGGAAGAATCGGTCGCCGTCGCCATTGATAGAGACAAGGGAAGCCAATACGCTCTGAAATGGACAGTCGATCATCTTCTCTCCAGAGGCCAAGCTCTCACTCTTCTCCATGTGAAGCAGAAAACATCTTCCATTCCCACTCCCATGGGGAACCATGTCGCAATATCTGAGGTGAACGATGACGTTGCGAGAACGTATAAGCTTCAATTGGAGAACCAAGCGAAAGAGATGTTCCTTCCGTTTCGATGCTTTTGCACGAGAAAGAATATTAAATGCAACGAAGTGATTATTGAAGACTCTGATATTCCAAAAACGCTTGTCAACTACGTTTCTTCAAATCTAATCGAGGTTTTAGTACTCGGCGCACCATCGAGAAGTGGCCTCGTCAAAAGGTTCAAGACAACCGATGTCCCGAGCAGTGTAACGAAAGTGGCGCCGGATTTCTGCACTGTCTATGTAATCGCTAAGGGAAAGATTGCATCCGTCCGATCTGCCACCAGTTCTCTTCCGGCAAAGCCTCCGCCAACTAATAATAGAATTGAGCACCTGGCAAGCCATAATTTAGATTCAACAGAAGCTATTCCAACAAGGCAACTAGTTCCAAGAGATCAGAGACAAGTGTATCAGCCACGTCTGCTTCAAGATGAATTCGAAATCAAATCGCCGTTCAATAGAGGACGAGTCTCGAGGAACAAATCATACGAGTCGTCGATGGGCGACTCTGACATATCATTTGTGAGTAGCGGGAGGCCTAGCCCGGAGCGATCATTTCCTTCTCACTATGATAATTTAGAGACAGGATTCACACCCCAGCTCTACGCTGGTTCGGAGTACGACTCTGGAAGCTTCCAAATGTTATGGTCCGGTTCAGGTTCGGGTTGTAGTTCGGTCGATATGAATTCTTCACAAGCTGGCTTCTCATCAAGCTTCTCATCTGGCTCCAGCTCGCAGGAGAGTTCCGTGTCATCTTGGTCATCACACAGCGTGGATGATGTGGAAGCTGAAATGAGGCGGCTCAAGTTAGAACTCAGACAAACAATGGACATGTACAGCACAGCGTGCAAAGAAGCAATCTCTGCAAAGCAGATGGCAAAAGAACTCCGATTCTGGAAATTGGAGGAAGAACAGAGATTAGGGGAGGCGAGAATGGCGGAGGAAGCTGCACTAGTGATTGCGGAGAGAGAAAGAGCCAAGTCCAGAGCGGCGACAGAGGCAGCAGAAGCAGCAAAGAGGATTGCAGAATTGGAAGCTAAGAAAAGAGTAAATGCAGAAATGAAAGCTCTGAGAGAATCAGAGGAGAGAGAAACAACGTCATTGCAGGGCTTTGCACCTGGAGAAATAAGGTACAGACGATACTCCATTGAAGAGATCGAAGCTGCTACGCAGGATTTCTCGGATTCTCTCAAGATCGGAGAAGGAGGGTATGGGCCGGTTTATATGGGAGAGCTCGACCACACTCAGGTCGCCATTAAAGTACTCCGACCAGATGCGGCTCAAGGGAAGTCGCAGTTTCAGCAAGAGGTTGAAGTTTTGAGCTGCATTAGGCATCCAAACATGGTGCTTCTTCTCGGCGCCTGTCCCGAATACGGTTGTCTAGTTTATGAATTCATGGCGAACGGAAGCTTAGAGGATCGTCTCTTCCGGCAAGGTAACACTCCCGTTCTCCCATGGCAGTTCCGTTTTCGTATCTCGGCGGAGATCGGAACCGCGCTTCTCTTTCTCCACAGTACCAAGCCGGAGCCGCTGGTCCATCGGGATCTAAAACCGGGGAACATCTTGCTCGATCGGAACTTCGTGAGCAAAATAAGTGACGTCGGACTGGCCAGACTGGTTCCTCCGTCAGTCGCCGACACCGTAACTCAGTACAGAATGACGTCGACGGCCGGAACTTTCTGCTACATCGATCCGGAATATCAACAAACTGGCCTCCTCGGGATAAAATCCGACGTGTATTCGCTCGGGGTAATGCTTTTGCAGATAATCACGGCGAAGCCGCCGATGGGGCTGACCCATCTGGTCGAGAGGGCGATAGAGAGGGGCACTTTCGCGGAGACGCTGGACCCAGCAGTGCCGGAATGGCCGGTGGAGGAGGCTCTCGGTTTTGCCAAAATTGCTCTTAAATGCGCGGAGATGAGGAAGAAGGACCGACCGGATCTCGGAAAGGTGGTGTTGCCGGAGCTGAACAGGCTGAGGAAGCTTGCGGAAGACAGCATGACGAACCTAATGCTCGGCCAACGCCCGCCATTGTCGTCGCCGGGACTAAACCACTATGGTTCTTCCAATTCTCAACCACCTCAAAGAAATCGCGAGGACTTGATCAGGGAAATAGAGTCGAGGAATAGAGCAAGCTCTTCACCCTTTCCCGCCTCCAGTGCAAGAACTAGAAGACCATATTCCTAG 2415 49.98 MSIEKKEESVAVAIDRDKGSQYALKWTVDHLLSRGQALTLLHVKQKTSSIPTPMGNHVAISEVNDDVARTYKLQLENQAKEMFLPFRCFCTRKNIKCNEVIIEDSDIPKTLVNYVSSNLIEVLVLGAPSRSGLVKRFKTTDVPSSVTKVAPDFCTVYVIAKGKIASVRSATSSLPAKPPPTNNRIEHLASHNLDSTEAIPTRQLVPRDQRQVYQPRLLQDEFEIKSPFNRGRVSRNKSYESSMGDSDISFVSSGRPSPERSFPSHYDNLETGFTPQLYAGSEYDSGSFQMLWSGSGSGCSSVDMNSSQAGFSSSFSSGSSSQESSVSSWSSHSVDDVEAEMRRLKLELRQTMDMYSTACKEAISAKQMAKELRFWKLEEEQRLGEARMAEEAALVIAERERAKSRAATEAAEAAKRIAELEAKKRVNAEMKALRESEERETTSLQGFAPGEIRYRRYSIEEIEAATQDFSDSLKIGEGGYGPVYMGELDHTQVAIKVLRPDAAQGKSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLFRQGNTPVLPWQFRFRISAEIGTALLFLHSTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGLLGIKSDVYSLGVMLLQIITAKPPMGLTHLVERAIERGTFAETLDPAVPEWPVEEALGFAKIALKCAEMRKKDRPDLGKVVLPELNRLRKLAEDSMTNLMLGQRPPLSSPGLNHYGSSNSQPPQRNREDLIREIESRNRASSSPFPASSARTRRPYS 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11006423 11010883 - Bma025511.1 Bma07g00657 85794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00657 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Bma07g00657 804 CDD STK_N 9 162 - -
Bma07g00657 804 Gene3D Transferase(Phosphotransferase) domain 1 542 748 - -
Bma07g00657 804 MobiDBLite consensus disorder prediction 310 332 - -
Bma07g00657 804 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 6 754 - -
Bma07g00657 804 Coils Coil 403 440 - -
Bma07g00657 804 MobiDBLite consensus disorder prediction 233 266 - -
Bma07g00657 804 Gene3D Phosphorylase Kinase; domain 1 450 541 - -
Bma07g00657 804 MobiDBLite consensus disorder prediction 757 772 - -
Bma07g00657 804 Pfam Universal stress protein family 10 147 IPR006016 -
Bma07g00657 804 PANTHER OS02G0152300 PROTEIN 6 754 - -
Bma07g00657 804 MobiDBLite consensus disorder prediction 233 259 - -
Bma07g00657 804 Pfam Protein kinase domain 472 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00657 804 SMART serkin_6 469 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00657 804 ProSiteProfiles Protein kinase domain profile. 469 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00657 804 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 143 - -
Bma07g00657 804 MobiDBLite consensus disorder prediction 747 804 - -
Bma07g00657 804 Gene3D HUPs 8 160 IPR014729 -
Bma07g00657 804 Coils Coil 334 354 - -
Bma07g00657 804 SUPERFAMILY Protein kinase-like (PK-like) 447 728 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00657 Bma11g00781 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01319 Bma-Chr1:18093973 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma01g02495 Bma-Chr1:82667761 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma02g00064 Bma-Chr2:512939 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma02g00346 Bma-Chr2:5577973 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma02g00535 Bma-Chr2:10539998 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma06g00886 Bma-Chr6:43740196 Bma07g00657 Bma-Chr7:11006423 3.30E-19 dispersed
Bma07g00657 Bma-Chr7:11006423 Bma09g00971 Bma-Chr9:49228083 0 dispersed
Bma01g01628 Bma-Chr1:42860646 Bma07g00657 Bma-Chr7:11006423 6.31E-14 transposed
Bma03g00771 Bma-Chr3:7053891 Bma07g00657 Bma-Chr7:11006423 6.58E-11 transposed
Bma07g00033 Bma-Chr7:1259551 Bma07g00657 Bma-Chr7:11006423 5.86E-16 transposed
Bma15g01071 Bma-Chr15:43006658 Bma07g00657 Bma-Chr7:11006423 1.35E-34 transposed
Bma11g00781 Bma-Chr11:22168228 Bma07g00657 Bma-Chr7:11006423 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66608 PF00069 Pkinase 4.30E-36 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00657 - - vvi:100262028 967.222