Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00696 ACCGACCTTTCCATTTTTACCGGCCGCCCGAAGCTCGAGAACTTTCTAGGTGGCTCTACTGTGACAGGATCTCCGGCTCCAACGCCAGCTCATTTCTCTGCTGAACATGAAATCTATGAGTCCGAGCTCAAAACCATAGCCGCGAGCTTCCTTCGCGGATATGCCTCCGGACAAGTCGACGTCAGAAATCAGTCACCTGTACCGGAATCTGCGCCGGTTGTTCAGTCCGAGCAAACTGTGAAGAAGGCGCTCGATACATTTGGCCAGCGTACGTCGATCTACCGTGGCGTTACCAGACATAGATGGACTGGTAGATACGAAGCGCATTTGTGGGATAACAGTTGCAGACGAGAAGGTCAGAGTAGAAAAGGAAGGCAAGGTGGATATGATAAGGAAGATAAAGCAGCAAGAGCATATGATCTTGCTGCCCTTAAGTACTGGGGTCCGACCACCACTACAAACTTTTCTGTCTGCAACTATGAGAAGGAGCTGGAGGAGATGAAGAACATGACCAGACAAGAATTTGTTGCTTCGCTTAGAAGGAAAAGTAGTGGGTTTTCTCGAGGAGCCTCCATTTATAGAGGAGTGACTAGGCATCATCAACATGGTAGGTGGCAAGCGAGGATTGGAAGGGTTGCAGGCAACAAAGATCTCTATCTGGGAACATTCGGTACTCAAGAAGAAGCTGCAGAAGCATATGACATTGCCGCCATAAAATTCAGAGGCCTCAATGCAGTGACCAACTTCGACATGAGCCGCTACGACATCAAAAGCATCGCCAGTACCAACCTTCCGATCGGAGGAGTTGCCGGGAAATCTAAAATCTCCTCCGATTCCATCTCCGATAGCAAAAGTCTCGACGGAAACCGGTTGGACGACAGAGATCATGCGGCTTCCTCTTCTTCAACCTTCCCGGCCCAACCTAATACCTCTGCATTAGCCTTCTCCATGCCTATCAAGCAAGACCTATCAGATAATAATTACTGGCCAATGCTCAGCTACCAAAACAGTTCCTTCCTCAACTCTAGAAACCCTAACCCACCTTTTTCCACGGAGTTTTCCTCAGGTTCTTCAGTTGATGAAGGTTACAACATTCATCTGCAAAATGGGGGTCATTCTGATCAGATTTCAAGTCAGTTTTCAACACCCATTTGCTTAAATGCTGAGATGAATGCTTATGAGGGTTCAAATCATCCAGGCTATGGAAACCTGGTAGGGCAAACGATGTATTCTAAACCTAATTTTTTTCAGACGGCCATTTTTGGTGTAGAATGA 1275 47.29 TDLSIFTGRPKLENFLGGSTVTGSPAPTPAHFSAEHEIYESELKTIAASFLRGYASGQVDVRNQSPVPESAPVVQSEQTVKKALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGPTTTTNFSVCNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDIKSIASTNLPIGGVAGKSKISSDSISDSKSLDGNRLDDRDHAASSSSTFPAQPNTSALAFSMPIKQDLSDNNYWPMLSYQNSSFLNSRNPNPPFSTEFSSGSSVDEGYNIHLQNGGHSDQISSQFSTPICLNAEMNAYEGSNHPGYGNLVGQTMYSKPNFFQTAIFGVE 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 14932798 14935466 + Bma025599.1 Bma07g00696 85833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00696 424 ProSiteProfiles AP2/ERF domain profile. 192 250 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 CDD AP2 191 252 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 SUPERFAMILY DNA-binding domain 191 252 IPR016177 GO:0003677
Bma07g00696 424 ProSiteProfiles AP2/ERF domain profile. 93 156 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 MobiDBLite consensus disorder prediction 272 309 - -
Bma07g00696 424 CDD AP2 92 155 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 62 294 - -
Bma07g00696 424 Gene3D AP2/ERF domain 192 252 IPR036955 GO:0003700|GO:0006355
Bma07g00696 424 Gene3D AP2/ERF domain 93 158 IPR036955 GO:0003700|GO:0006355
Bma07g00696 424 Pfam AP2 domain 93 148 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 Pfam AP2 domain 192 242 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 PRINTS Ethylene responsive element binding protein signature 232 252 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 62 294 - -
Bma07g00696 424 SUPERFAMILY DNA-binding domain 92 157 IPR016177 GO:0003677
Bma07g00696 424 SMART rav1_2 192 256 IPR001471 GO:0003700|GO:0006355
Bma07g00696 424 SMART rav1_2 93 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00647 Bma-Chr6:34511454 Bma07g00696 Bma-Chr7:14932798 6.02E-09 dispersed
Bma07g00126 Bma-Chr7:1983908 Bma07g00696 Bma-Chr7:14932798 5.19E-06 dispersed
Bma07g00696 Bma-Chr7:14932798 Bma14g01163 Bma-Chr14:16921957 5.80E-122 dispersed
Bma15g00429 Bma-Chr15:4647271 Bma07g00696 Bma-Chr7:14932798 2.66E-06 dispersed
Bma07g00696 Bma-Chr7:14932798 Bma07g01409 Bma-Chr7:49858960 2.45E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57620 PF00847 AP2 4.70E-09 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00696 K09285 - qsu:112025300 524.242