Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00707 | ATGGGTTTCGTCCACAATATCGGGAAGTACCAGCTAGGTCGGACGATTGGGGAGGGGAGTTTCGCGAAGGTGAAGCTCGCAGTGGATAGCACTAATGGCCACCAGGTTGCGATAAAGATCATTGATAAACACATGGTTATGGAAAGCAATCTCAAATCTCAGGTTCAGAGAGAGATAAGAACAATGAAGCTTCTGCATCATCCCAACATCGTTAGAATCCACGAGGTTATTGGTTCGAAATCAAAGATTTACCTCGTCATGGAATATGTTTGTGGAGGACAACTTTCAGACAGGATGTCATTTTACGAGAAACTGGCGGAAGATGAAGCGCGGAAGATATTCCAGCAGCTGATCGATGCCATAGATTATTGCCATAATAAAGGAATATATCACAGAGACCTTAAGCCAGAAAACTTGCTGCTCGATCAGAAGGGCAATCTCAAGATCTCTGATTTTGGACTTAGCGCATTTAAGAAGCCTGGTGACTTGCTAACTACAGCATGTGGCTCTCCCAGCTATGTGGCACCAGAGCTTCTTGTAAATCGCGGCTATGATGGGGCGGCTGCAGATGTTTGGTCGTGTGGCGTAGTTCTTTTCGAGATGCTTGCCGGCTACTTGCCGTTTGATGAGCGCAACCTGATGAACTTGTACAAGAAGATATCTAGAGCAGAATATACATTTCCAAACTGGATTTCAGAAGGAGCAACAAACCTGATCTCCAAAATTCTTGAGCCTGATCCAAGAAAGAGAATTACAATCTCCGAAATAATGGAGGATCCATGGTTTCAAGAAAATTACATCCCTAATAACGGATACGAAAGCGAAGAGAAGATCTATTTGGATGATGTTAATGCTGCATTTGATTCTATTGATGAGAATGTTGTCGAGACGAAGATCCCAAAATCGCCGAGTTTTATCAATGCTTTTCGACTGATAGCTATGTCAAGCGATCTTGATTTGTCCGGTCTTTTTGAAGGACAGGACGAACACAAACAAAAAGTGAGATTTGGATCAAATCTTAACATCAAAGAAACAATCGAAAAAATCGAAGCTGCTGCAACAGACTCGAGCTTATCGGTTGAAAAAAGAAACAACTTCAGGATGAAAATTCATCCAAAACAAAAGATGACCAGATGTTCTAGATCACATTTAGATCTATCAGCAGAGGTGATTGAGGTTTCTCCGACTGATTGTGTCATCGAAGTATCAAAATCTGCCGGAGAACTCGTAACCTACGACAAATTCTGCCGAAGTTTAGCAAGTCTTTTGACACAGAAGCCGAATTCTTCGCCCGATCTTCAACCATCGGACAAAATCTCTGTCCTGCACGAAATCGAATGCTCTGCAGATCTATGA | 1356 | 42.48 | MGFVHNIGKYQLGRTIGEGSFAKVKLAVDSTNGHQVAIKIIDKHMVMESNLKSQVQREIRTMKLLHHPNIVRIHEVIGSKSKIYLVMEYVCGGQLSDRMSFYEKLAEDEARKIFQQLIDAIDYCHNKGIYHRDLKPENLLLDQKGNLKISDFGLSAFKKPGDLLTTACGSPSYVAPELLVNRGYDGAAADVWSCGVVLFEMLAGYLPFDERNLMNLYKKISRAEYTFPNWISEGATNLISKILEPDPRKRITISEIMEDPWFQENYIPNNGYESEEKIYLDDVNAAFDSIDENVVETKIPKSPSFINAFRLIAMSSDLDLSGLFEGQDEHKQKVRFGSNLNIKETIEKIEAAATDSSLSVEKRNNFRMKIHPKQKMTRCSRSHLDLSAEVIEVSPTDCVIEVSKSAGELVTYDKFCRSLASLLTQKPNSSPDLQPSDKISVLHEIECSADL | 451 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 16337777 | 16340434 | - | Bma025622.1 | Bma07g00707 | 85844 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00707 | 451 | Gene3D | Transferase(Phosphotransferase) domain 1 | 4 | 304 | - | - | |
Bma07g00707 | 451 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED | 6 | 432 | - | - | |
Bma07g00707 | 451 | PANTHER | SERINE/THREONINE KINASE | 6 | 432 | - | - | |
Bma07g00707 | 451 | ProSitePatterns | Protein kinases ATP-binding region signature. | 16 | 39 | IPR017441 | GO:0005524 | |
Bma07g00707 | 451 | Pfam | Protein kinase domain | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma07g00707 | 451 | Pfam | NAF domain | 303 | 362 | IPR004041 | GO:0007165 | |
Bma07g00707 | 451 | CDD | CIPK_C | 307 | 419 | - | - | |
Bma07g00707 | 451 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 308 | IPR011009 | - | |
Bma07g00707 | 451 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Bma07g00707 | 451 | SMART | serkin_6 | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma07g00707 | 451 | Gene3D | Kinase associated domain 1, KA1 | 305 | 425 | - | - | |
Bma07g00707 | 451 | ProSiteProfiles | NAF domain profile. | 301 | 325 | IPR018451 | GO:0007165 | |
Bma07g00707 | 451 | ProSiteProfiles | Protein kinase domain profile. | 10 | 262 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g00932 | Bma-Chr4:13220882 | Bma07g00707 | Bma-Chr7:16337777 | 6.87E-47 | dispersed | |
Bma07g00142 | Bma-Chr7:2092826 | Bma07g00707 | Bma-Chr7:16337777 | 1.51E-43 | dispersed | |
Bma07g00707 | Bma-Chr7:16337777 | Bma11g00896 | Bma-Chr11:34141643 | 4.26E-141 | dispersed | |
Bma11g00167 | Bma-Chr11:1521602 | Bma07g00707 | Bma-Chr7:16337777 | 3.49E-37 | dispersed | |
Bma07g00707 | Bma-Chr7:16337777 | Bma14g00807 | Bma-Chr14:9006692 | 2.33E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66609 | PF00069 | Pkinase | 3.70E-77 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00707 | - | - | pvy:116135540 | 658.677 |