Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00707 ATGGGTTTCGTCCACAATATCGGGAAGTACCAGCTAGGTCGGACGATTGGGGAGGGGAGTTTCGCGAAGGTGAAGCTCGCAGTGGATAGCACTAATGGCCACCAGGTTGCGATAAAGATCATTGATAAACACATGGTTATGGAAAGCAATCTCAAATCTCAGGTTCAGAGAGAGATAAGAACAATGAAGCTTCTGCATCATCCCAACATCGTTAGAATCCACGAGGTTATTGGTTCGAAATCAAAGATTTACCTCGTCATGGAATATGTTTGTGGAGGACAACTTTCAGACAGGATGTCATTTTACGAGAAACTGGCGGAAGATGAAGCGCGGAAGATATTCCAGCAGCTGATCGATGCCATAGATTATTGCCATAATAAAGGAATATATCACAGAGACCTTAAGCCAGAAAACTTGCTGCTCGATCAGAAGGGCAATCTCAAGATCTCTGATTTTGGACTTAGCGCATTTAAGAAGCCTGGTGACTTGCTAACTACAGCATGTGGCTCTCCCAGCTATGTGGCACCAGAGCTTCTTGTAAATCGCGGCTATGATGGGGCGGCTGCAGATGTTTGGTCGTGTGGCGTAGTTCTTTTCGAGATGCTTGCCGGCTACTTGCCGTTTGATGAGCGCAACCTGATGAACTTGTACAAGAAGATATCTAGAGCAGAATATACATTTCCAAACTGGATTTCAGAAGGAGCAACAAACCTGATCTCCAAAATTCTTGAGCCTGATCCAAGAAAGAGAATTACAATCTCCGAAATAATGGAGGATCCATGGTTTCAAGAAAATTACATCCCTAATAACGGATACGAAAGCGAAGAGAAGATCTATTTGGATGATGTTAATGCTGCATTTGATTCTATTGATGAGAATGTTGTCGAGACGAAGATCCCAAAATCGCCGAGTTTTATCAATGCTTTTCGACTGATAGCTATGTCAAGCGATCTTGATTTGTCCGGTCTTTTTGAAGGACAGGACGAACACAAACAAAAAGTGAGATTTGGATCAAATCTTAACATCAAAGAAACAATCGAAAAAATCGAAGCTGCTGCAACAGACTCGAGCTTATCGGTTGAAAAAAGAAACAACTTCAGGATGAAAATTCATCCAAAACAAAAGATGACCAGATGTTCTAGATCACATTTAGATCTATCAGCAGAGGTGATTGAGGTTTCTCCGACTGATTGTGTCATCGAAGTATCAAAATCTGCCGGAGAACTCGTAACCTACGACAAATTCTGCCGAAGTTTAGCAAGTCTTTTGACACAGAAGCCGAATTCTTCGCCCGATCTTCAACCATCGGACAAAATCTCTGTCCTGCACGAAATCGAATGCTCTGCAGATCTATGA 1356 42.48 MGFVHNIGKYQLGRTIGEGSFAKVKLAVDSTNGHQVAIKIIDKHMVMESNLKSQVQREIRTMKLLHHPNIVRIHEVIGSKSKIYLVMEYVCGGQLSDRMSFYEKLAEDEARKIFQQLIDAIDYCHNKGIYHRDLKPENLLLDQKGNLKISDFGLSAFKKPGDLLTTACGSPSYVAPELLVNRGYDGAAADVWSCGVVLFEMLAGYLPFDERNLMNLYKKISRAEYTFPNWISEGATNLISKILEPDPRKRITISEIMEDPWFQENYIPNNGYESEEKIYLDDVNAAFDSIDENVVETKIPKSPSFINAFRLIAMSSDLDLSGLFEGQDEHKQKVRFGSNLNIKETIEKIEAAATDSSLSVEKRNNFRMKIHPKQKMTRCSRSHLDLSAEVIEVSPTDCVIEVSKSAGELVTYDKFCRSLASLLTQKPNSSPDLQPSDKISVLHEIECSADL 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 16337777 16340434 - Bma025622.1 Bma07g00707 85844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00707 451 Gene3D Transferase(Phosphotransferase) domain 1 4 304 - -
Bma07g00707 451 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 432 - -
Bma07g00707 451 PANTHER SERINE/THREONINE KINASE 6 432 - -
Bma07g00707 451 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Bma07g00707 451 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00707 451 Pfam NAF domain 303 362 IPR004041 GO:0007165
Bma07g00707 451 CDD CIPK_C 307 419 - -
Bma07g00707 451 SUPERFAMILY Protein kinase-like (PK-like) 7 308 IPR011009 -
Bma07g00707 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bma07g00707 451 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00707 451 Gene3D Kinase associated domain 1, KA1 305 425 - -
Bma07g00707 451 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Bma07g00707 451 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g00932 Bma-Chr4:13220882 Bma07g00707 Bma-Chr7:16337777 6.87E-47 dispersed
Bma07g00142 Bma-Chr7:2092826 Bma07g00707 Bma-Chr7:16337777 1.51E-43 dispersed
Bma07g00707 Bma-Chr7:16337777 Bma11g00896 Bma-Chr11:34141643 4.26E-141 dispersed
Bma11g00167 Bma-Chr11:1521602 Bma07g00707 Bma-Chr7:16337777 3.49E-37 dispersed
Bma07g00707 Bma-Chr7:16337777 Bma14g00807 Bma-Chr14:9006692 2.33E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66609 PF00069 Pkinase 3.70E-77 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00707 - - pvy:116135540 658.677