Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00722 ATGATAACTTGCTCACCTGAGAATATTGTGATTGGATTAGGAGCTCCGAGCCAGTCTTTGTCCGGAACTTTATCTTGGGCTATTGGAAATCTCACTAATCTTCGACAAGTGTTGTTGCAGAACAACAACATTTCAGGCACAATTCCCCCGGAATTAGGAGCTCTTCCCATGCTTCAGACGTTAGATCTTTCTAACAATAGATTCTCTGGATTAGTTCCTCAGACTTTGGGTCAGTTGAATGGTCTCCACTATCTGAGACTCAACAACAATAGCTTGTCTGGTCCTTTTCCCATGTCTTTAGCCAAGATTTCACAGCTTGCTTTCTTGGATTTGTCGTTCAACAGTCTCAGTGGTCCGGTGCCGAAATTTCCACTTAAAACATTCAATGTTGTGGGAAACCCTTTGATTTGTGGAAGCAGCTCTGCTGAAAGTTGTTCTGGATTATCTACCCCTGTTCCTCTTTCATTCACTCTAGACTCATCATCTCCTGGAAGACAAAAGTCTAAAAAACTTGCAATTTCCCTTGGGATCAGTCTCAGCTGTGCATTTTTAGTTCTCATAGCTCTTGGAATTCTTTGGCGAAGAAAAAGGCTGAAAAACCAATCAATCCTGCTCATAAACGAAAACCAGGAAGTGGGACTAATGAGCTTAGGCAACCTAAGAAACTTCACTTTCAAAGAACTCCAGTCAGCAACAGACCATTTCAGCTCCAAGAACATTCTTGGTGCTGGAGGCTTTGGTAATGTATATAAAGGAAAGTTAAGCGACGGGATGATAGTGGCAGTGAAACGACTCAAAGATGTCACCGGAACAACTGGTGAATCCCAATTTCAGACGGAATTAGAAATGATCAGTCTGGCCGTCCATCGGAATTTGCTTCGCTTGATTGGCTACTGCGCCACTTCACACGAGAAGCTCTTGGTTTACCCTTACATGTCTAATGGCAGTGTGGCTGCTCGCCTTAGAGGAAAACCAGCATTAGATTGGAATACAAGGAAGAGAATAGCAATTGGAGCTGCAAGGGGATTGCTATATCTACATGAGCAATGTGATCCAAAGATAATTCATAGAGATGTGAAGGCTGCAAATGTTCTACTCGATGATTTCTACGAAGCTGTGGTTGGCGATTTTGGCCTGGCAAAGCTGCTCGACCATGCTGATTCACACGTGACCACTGCTGTTCGTGGCACTGTTGGGCACATTGCACCTGAATACCTCTCCACCGGTCAGTCGTCTGAGAAAACCGACGTTTTTGGATTTGGAATTTTGTTGTTGGAGCTTATAACTGGTATGAGAGCTCTTGACTTTGGCAAAACGATTAATCAGAAAGGGGCGATGCTCGAGTGGGTGAAGAAGATACAACAGGATAATAAAGTGGAGTTGGCGGTGGACAGAGAGCTGGGGAACAACTATGACAAGATAGAAGTTGTTGAAATGTTGCAAGTAGCTCTTCTTTGCACTCACTACCTTCCGACTCATCGCCCTAAGATGTCTGAAGTGGTTCGAATGCTTGAAGGCGACGGCCTCGTTGATAAATGGGCTGCCTCGAACAATCACTCGAATCCCAACATCAACCTCTTCCAAACCCAAAGCACAAGCAAAAGCACACTTAGAACTTTGTCAGCAACTAAGCAGGACAGCGATGATCGCGATTGTTCAAGCATGTTCACTGCCGGTTTGGAGGAAGACGATGATGATCGGTCAATGGATTCCTATCCCATGGAACTTTCGGGTCCGAGGTGA 1743 44.64 MITCSPENIVIGLGAPSQSLSGTLSWAIGNLTNLRQVLLQNNNISGTIPPELGALPMLQTLDLSNNRFSGLVPQTLGQLNGLHYLRLNNNSLSGPFPMSLAKISQLAFLDLSFNSLSGPVPKFPLKTFNVVGNPLICGSSSAESCSGLSTPVPLSFTLDSSSPGRQKSKKLAISLGISLSCAFLVLIALGILWRRKRLKNQSILLINENQEVGLMSLGNLRNFTFKELQSATDHFSSKNILGAGGFGNVYKGKLSDGMIVAVKRLKDVTGTTGESQFQTELEMISLAVHRNLLRLIGYCATSHEKLLVYPYMSNGSVAARLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFYEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALDFGKTINQKGAMLEWVKKIQQDNKVELAVDRELGNNYDKIEVVEMLQVALLCTHYLPTHRPKMSEVVRMLEGDGLVDKWAASNNHSNPNINLFQTQSTSKSTLRTLSATKQDSDDRDCSSMFTAGLEEDDDDRSMDSYPMELSGPR 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18278365 18281815 - Bma025656.1 Bma07g00722 85859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00722 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 354 366 IPR008271 GO:0004672|GO:0006468
Bma07g00722 580 Gene3D Phosphorylase Kinase; domain 1 205 311 - -
Bma07g00722 580 ProSitePatterns Protein kinases ATP-binding region signature. 241 263 IPR017441 GO:0005524
Bma07g00722 580 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 1 580 - -
Bma07g00722 580 SMART LRR_typ_2 31 54 IPR003591 -
Bma07g00722 580 SMART LRR_typ_2 55 78 IPR003591 -
Bma07g00722 580 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 580 - -
Bma07g00722 580 Pfam Leucine rich repeat 58 116 IPR001611 GO:0005515
Bma07g00722 580 SMART serkin_6 235 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00722 580 ProSiteProfiles Protein kinase domain profile. 235 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00722 580 Gene3D Transferase(Phosphotransferase) domain 1 312 522 - -
Bma07g00722 580 MobiDBLite consensus disorder prediction 543 562 - -
Bma07g00722 580 PRINTS Leucine-rich repeat signature 58 71 - -
Bma07g00722 580 PRINTS Leucine-rich repeat signature 103 116 - -
Bma07g00722 580 MobiDBLite consensus disorder prediction 521 542 - -
Bma07g00722 580 Pfam Protein tyrosine and serine/threonine kinase 238 504 IPR001245 GO:0004672|GO:0006468
Bma07g00722 580 Gene3D Ribonuclease Inhibitor 1 147 IPR032675 -
Bma07g00722 580 SUPERFAMILY L domain-like 18 148 - -
Bma07g00722 580 SUPERFAMILY Protein kinase-like (PK-like) 215 505 IPR011009 -
Bma07g00722 580 MobiDBLite consensus disorder prediction 521 580 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00722 Bma-Chr7:18278365 Bma12g00378 Bma-Chr12:7224813 6.40E-141 dispersed
Bma07g00722 Bma-Chr7:18278365 Bma07g00724 Bma-Chr7:18574395 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66610 PF00069 Pkinase 3.80E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00722 - - csv:101218629 926.776