Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00731 ATGAACCCTCAGAACACAGTCTTCGACGCAAAGCGCCTGATTGGCCGGAGGTTTTCTGATCCCTCCGTTCAGAGCGATATGAAGCTCTGGCCTTTTAAAGTCATTCCCGGCCCCGGTGACAAACCGATGATAGTCATCACGTACAAAGGAGACAGTAAGCAGTTCTCTCCAGAAGAAATTTCATCGATGGTGCTTATCAAAATGAGGGAAATAGCAGAGGCGTTCCTCAGTCAGCCGATAAAGAACGCCGTAATAACAGTTCCGGCGTATTTCAACGATTCCCAGAGGCAAGCCACTAAAGACGCCGGAATCATAGCCGGTCTCAACGTCATGAGAATGATCAATGAACCAACGGCTGCCGCCATAGCTTACGGATTGGATAAGAAAGCGTCGAGAAAAGGCGAACAGAACATCCTCATCTTTGATCTCGGCGGCGGTACCTTTGACGTCTCTTTGCTGTCGATCGAAGAAGGAATTTTCGAGGTCAAAGCGACCGCTGGAGACACTCATCTCGGTGGTGAAGATTTTGACAATCGGATGGTGAACCATTTCGTTGCAGAGTTCAAACGAAAGAACAAGAAAGATATCAGCGGCAACGCTAGAGCTTTGCGAAGGCTGAGAACTGCTTGCGAAAGAGCGAAAAGAACTTTGTCTTCAACCTCGCAAACGACTATCGAAATTGATTCTTTGTACGAAGGAATGGATTTCTACGCCACGATAACCAGAGCTCGATTCGAGGAATTGAACATGGATCTGTTCAGAAAATGCATGGAGCCCGTGGAAAAATGTATTCGTGATGCGAAAATCGATAAAAGTCAGGTCGATGAAGTAGTTTTGGTTGGAGGGTCGACGAGAATTCCGAAAGTTCAGCAACTTTTGCAGGATTATTTCAATGGAAAGGAGCTCTGCAAGAGCATCAATCCAGACGAAGCAGTCGCCTATGGAGCTGCAGTTCAAGCCGCAATTTTGAGTGGTGAAGGTGATGAGAAGGTGCAGGATCTGCTGCTTCTCGACGTCACGCCTCTCAGTTTAGGTCTCGAGACTGCCGGCGGAGTTATGACGGTGCTTATTCCGAGAAACACTACGATTCCGACTAAGAAGGAGCAGATTTTCTCCACTTACTCAGACAATCAACCAGGAGTTCTAATCCAGGTTTACGAAGGAGAACGAGCCCGGACTAAAGATAACAATCTGCTCGGAAAGTTTGAGCTCACCGGCATTCCGCCAGCTCCGAGAGGTGTACCACAGATCAATGTTGTCTTCGACATTGATGCCAACGGAATACTAAATGTAACGGCGGAGGACAAGACCGCCGGAGTAAAGAATAGAATCACCATCACAAACGACAAAGGAAGACTGAGCAAGGAGGAGATAGAGAAAATGGTGCAAGACGCAGAGAAATACAAAGCAGAAGACGAGGTCGTGAAGAAGAAGGTGGAGGCGAAGAATGCGTTAGAGAACTACGCCTACAACATGAGGAACACGGTGAGGGACGAGAAATTTGCCGGAAAATTAAACCCAGAAGACAAAGGGAAAATCGACAAGGCGGTGGAGGAGGCCATAGAGTGGCTGGAGAGGAACCAGTTAGCGGAGGTTGAAGAGTTTGAAGACAAGCTGAAAGAATTGGAGCAGCTCTGCAATCCAATCATCTCCAAGATGTATCAAGGCGATGCTTCCATGGCCGACGAGGTGCCAGGCGGTGGTAGCTATGGAAGTTCGTCTACCAGTGCAGGCGGAGCCGGGCCGAAGATTGAAGAAGTTGATTAA 1767 48.1 MNPQNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVITYKGDSKQFSPEEISSMVLIKMREIAEAFLSQPIKNAVITVPAYFNDSQRQATKDAGIIAGLNVMRMINEPTAAAIAYGLDKKASRKGEQNILIFDLGGGTFDVSLLSIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVAEFKRKNKKDISGNARALRRLRTACERAKRTLSSTSQTTIEIDSLYEGMDFYATITRARFEELNMDLFRKCMEPVEKCIRDAKIDKSQVDEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVTAEDKTAGVKNRITITNDKGRLSKEEIEKMVQDAEKYKAEDEVVKKKVEAKNALENYAYNMRNTVRDEKFAGKLNPEDKGKIDKAVEEAIEWLERNQLAEVEEFEDKLKELEQLCNPIISKMYQGDASMADEVPGGGSYGSSSTSAGGAGPKIEEVD 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19203020 19204786 + Bma025679.1 Bma07g00731 85868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00731 588 Gene3D - 483 556 IPR029048 -
Bma07g00731 588 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 1 565 - -
Bma07g00731 588 Pfam Hsp70 protein 1 555 IPR013126 GO:0005524|GO:0140662
Bma07g00731 588 PRINTS 70kDa heat shock protein signature 414 430 - -
Bma07g00731 588 PRINTS 70kDa heat shock protein signature 306 326 - -
Bma07g00731 588 PRINTS 70kDa heat shock protein signature 146 156 - -
Bma07g00731 588 PRINTS 70kDa heat shock protein signature 83 103 - -
Bma07g00731 588 PRINTS 70kDa heat shock protein signature 274 290 - -
Bma07g00731 588 PRINTS 70kDa heat shock protein signature 333 352 - -
Bma07g00731 588 PANTHER HEAT SHOCK PROTEIN 70KDA 1 565 IPR013126 GO:0005524|GO:0140662
Bma07g00731 588 SUPERFAMILY Actin-like ATPase domain 1 128 IPR043129 -
Bma07g00731 588 ProSitePatterns Heat shock hsp70 proteins family signature 2. 140 153 IPR018181 -
Bma07g00731 588 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 329 486 IPR029047 -
Bma07g00731 588 Coils Coil 525 545 - -
Bma07g00731 588 MobiDBLite consensus disorder prediction 560 588 - -
Bma07g00731 588 Gene3D - 129 303 - -
Bma07g00731 588 Gene3D - 1 321 - -
Bma07g00731 588 SUPERFAMILY Actin-like ATPase domain 133 325 IPR043129 -
Bma07g00731 588 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 328 482 IPR029047 -
Bma07g00731 588 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 480 557 IPR029048 -
Bma07g00731 588 Gene3D Actin; Chain A, domain 4 172 255 - -
Bma07g00731 588 Gene3D - 8 63 - -
Bma07g00731 588 ProSitePatterns Heat shock hsp70 proteins family signature 3. 277 291 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01879 Bma-Chr1:69104163 Bma07g00731 Bma-Chr7:19203020 0 dispersed
Bma04g00660 Bma-Chr4:6354896 Bma07g00731 Bma-Chr7:19203020 0 dispersed
Bma07g00731 Bma-Chr7:19203020 Bma10g00293 Bma-Chr10:2671676 0 dispersed
Bma07g00731 Bma-Chr7:19203020 Bma08g00994 Bma-Chr8:49032753 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00731 K03283 - mnt:21397116 1006.51