Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00742 ATGATTGTGGAAAATCAAAGAAGTGGTTTGGCGGCTGAAAATGGATCCGCCGACGGATTCCCGGTTGGTATGCGTGTTCTTGCCGTCGACGACGACCCTATTTGCCTTAAAGTTTTGGAGACTCTACTTCGCAGATGCAAATATCACGTTACCACTACAAATCAGGCGGTCCAGGCTCTGAAAATGTTGAGGGAAAACAGAAATATGTTTGACCTTGTTATCAGTGATGTAAATATGCCGGACATGGATGGATTTAAACTCCTTGAGCATGTGGGGCTCGAAATGGACTTACCCGTTATCATGTTGTCAGCTCATAGCGATACCGAGCTTGTAATGAAGGGCGTTACTCATGGTGCTTGCGATTATTTGCTGAAACCTGTTCGAATCGAGGAGCTAAAGAACATATGGCAACACGTGATTCGAAGAAGGAAGTTTGATTTGAAAGAACAAAACAATTCCACCAATCAAAACATTTATCAGCAAGGAAACAGCGAAAGCGAACAAGCTTTTTCCTCAACCGAAAATGGAGAAAATGGGAAACTGAACAGAAAGCGGAAGGATCAAAACGAAGATGAAGAAGAGGAAGGGGAAGAGATTGAACATGAGAACGAAGACCCTTCAACCCAGAAGAAGCCTCGAGTAGTTTGGTCGGTCGAGTTGCACCGGAAATTCGTTGCAGCTGTTCATCAGCTCGGCCTCGATAAGGCTGTTCCGAAGAAGATACTCGATCTCATGAATGTTGAAGGACTCACACGAGAAAATGTAGCCAGCCATTTGCAGAAATACAGGCTCTACCTGAAAAGAATCAGCAGTGTGGCAACCCAGCAAGCTAATATTGCTGCTGCTTTGGGAGTTAAAGATGCCTCTTACATGCGAATTGGGACCATTGATGGATTTGGAGACTTGTGCTCCTTAGCCGGAAATGGAAGATTTTCAAACACACCATTATCATCATATCCACCCAGTGGAATGCTCGGAAGATTGAATACACCAGCCGGATTGACCCTTCATGGAATCGCTTCTTCTGGGCTCGTCCAACAAGGCAATTCCCAAAACTTAAATAATCCGGCGACTACCCTTGGTAAAGTCGAGGCCGGAATGTGTTCTACGAATCAAACTCCAAGCATATTTCAAGGGATTCCAACTTCATTACAGATCAGTCAGTTGCAGCCAGGAAAACCCAGTACTGTGATGAAAGAGTTTAACCCCATTAATGGTGGATCGGGTTTTACACTATCGAACAATTCTATGTCCACTTCGTCTTTGGTATTACAAGGTAATACGACTCAAATACCAAGTAGGAGAGGATTTGGAGCTGAATCTTCTGCAAAAGTGGCTTCATCGAGTCAAGATTCTTTCGATATTGGCATCAACGGTTCTAATAACTTAGATCACAATCGATGCGATGAAAACTGGAATCACGCAGTTCAAATGTCCAGTTTCTCATTAAATCCGTTTGAGAATTACGCTCATGATCGATTGACTTCAAATAACATGAGTATTTCTACTACCCATTCTAGTATTGGGAGAGTTCCTATTGATTACTCTTCGACTGGTGCCGTTTTGGATCCTAAGCAGGATTCAAGTGGGGATCGATACCAAGAAGGGTTAATCGGAAATATTGTTCAAACGATGAATGTTCTACCAAAACGAAGGTTGGACGAAAATAGGCATGGTTTCCATCAGAATATGAATCATTCTTACACAGCTGTAGATTGTATGGGTTCTTCTGGTTTCTTAGGGTCGATTATGGACCAAAATAATACAGCCGGTCGTAAAGTGTTTGATCTTTCTTTCAGTAATCATTTAATAACGGGCGGAACTCCTTTATATGTTCAGCATGGGAACAGTCTCTTACATCAAACTAAATCGCAGGATGGAGCCGTTCAAAGCAATTATGAATCATTTGATGATGTCATGAATGCAATGATCAAACAGGTATGGTCAAATATTTGGCTTAAATATCAAATTAAAAACGTTCGTTTTTGGATAACATATAATTTCAAATACTTGTAA 2016 41.72 MIVENQRSGLAAENGSADGFPVGMRVLAVDDDPICLKVLETLLRRCKYHVTTTNQAVQALKMLRENRNMFDLVISDVNMPDMDGFKLLEHVGLEMDLPVIMLSAHSDTELVMKGVTHGACDYLLKPVRIEELKNIWQHVIRRRKFDLKEQNNSTNQNIYQQGNSESEQAFSSTENGENGKLNRKRKDQNEDEEEEGEEIEHENEDPSTQKKPRVVWSVELHRKFVAAVHQLGLDKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISSVATQQANIAAALGVKDASYMRIGTIDGFGDLCSLAGNGRFSNTPLSSYPPSGMLGRLNTPAGLTLHGIASSGLVQQGNSQNLNNPATTLGKVEAGMCSTNQTPSIFQGIPTSLQISQLQPGKPSTVMKEFNPINGGSGFTLSNNSMSTSSLVLQGNTTQIPSRRGFGAESSAKVASSSQDSFDIGINGSNNLDHNRCDENWNHAVQMSSFSLNPFENYAHDRLTSNNMSISTTHSSIGRVPIDYSSTGAVLDPKQDSSGDRYQEGLIGNIVQTMNVLPKRRLDENRHGFHQNMNHSYTAVDCMGSSGFLGSIMDQNNTAGRKVFDLSFSNHLITGGTPLYVQHGNSLLHQTKSQDGAVQSNYESFDDVMNAMIKQVWSNIWLKYQIKNVRFWITYNFKYL 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20021750 20024884 - Bma025701.1 Bma07g00742 85879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00742 671 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 651 IPR045279 GO:0009736
Bma07g00742 671 SUPERFAMILY CheY-like 23 147 IPR011006 -
Bma07g00742 671 Coils Coil 182 202 - -
Bma07g00742 671 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
Bma07g00742 671 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Bma07g00742 671 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 651 - -
Bma07g00742 671 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Bma07g00742 671 Gene3D - 23 162 - -
Bma07g00742 671 MobiDBLite consensus disorder prediction 151 177 - -
Bma07g00742 671 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Bma07g00742 671 PIRSF RR_ARR_type-B 4 667 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bma07g00742 671 CDD REC_typeB_ARR-like 26 140 - -
Bma07g00742 671 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Bma07g00742 671 MobiDBLite consensus disorder prediction 151 210 - -
Bma07g00742 671 Gene3D - 207 270 - -
Bma07g00742 671 SMART REC_2 24 136 IPR001789 GO:0000160
Bma07g00742 671 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00295 Bma07g00742 CCT
Bma06g00994 Bma07g00742 CCT
Bma01g00295 Bma07g00742 ECH
Bma06g00994 Bma07g00742 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01144 Bma-Chr4:28858431 Bma07g00742 Bma-Chr7:20021750 6.43E-108 dispersed
Bma05g01022 Bma-Chr5:48731842 Bma07g00742 Bma-Chr7:20021750 4.85E-110 dispersed
Bma05g01331 Bma-Chr5:52866826 Bma07g00742 Bma-Chr7:20021750 1.34E-23 dispersed
Bma06g01483 Bma-Chr6:51407722 Bma07g00742 Bma-Chr7:20021750 3.32E-35 dispersed
Bma07g00742 Bma-Chr7:20021750 Bma14g02067 Bma-Chr14:44031721 4.52E-31 dispersed
Bma10g01320 Bma-Chr10:46835309 Bma07g00742 Bma-Chr7:20021750 6.93E-21 dispersed
Bma12g00832 Bma-Chr12:38612094 Bma07g00742 Bma-Chr7:20021750 6.46E-18 dispersed
Bma12g00984 Bma-Chr12:41886543 Bma07g00742 Bma-Chr7:20021750 1.71E-20 dispersed
Bma07g00742 Bma-Chr7:20021750 Bma06g00994 Bma-Chr6:46458801 6.26E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57623 PF00072 Response_reg 1.40E-25 CL0304 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00742 K14491 - qsu:112019876 710.679