Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00794 ATGGAGAACGAGCCGCTTCTCTCCTATATAAACGCAAGAAGAATACCATCGACACTGCCACCCCGACTCTGCCCCCTTCCTGAAAACGACGATGTTACATTTCCGATGACTCCGACAGAACTCAAAGACCGGATCATTTTTGGGCCGTCTTCGCCACAGGATTCTCTTCCCATTGTTGAAGCTCTAACCCTCTCTCTTACTTCTCCCAGGCCCTCTTCCGCCTCTTCTTTTCAGGACCAGACTACCCCTCGTGACCCTCAGTCTCAATCGAAACAAGCGTGGCCGATTGACCCCAACGACCCATGGACCAAAACCAAATTCCACCGCTCCAAAACCGCACCCGCCATGGCTACAATCAATGAAATTAACCAGGCCACTGCCCCTAGGCCTCAATTCGCTAAACAAAAGATTGTTCGTCAGGGTTGTATTCTTCTCACTTTGTACTTGTCACTGGGTGTGATCATATATTATCTAAATCGAGATCATTTTTCTACAATCGAGACTCATCCTATAGTTGATGCACTGTATTTCTGCATTGTTACAATGTGCACAATCGGTTATGGAGATATTACGCCAACTAGTACAGCGACAAAGTTGTTTTCAGTACTTTTTGTGTTGGTGGGGTTCGGCTTTATTGATATATTGCTCTCTGGGATGGTAAGTTACGTGCTTGATTTGCAAGAGAGTTATTTGCTGAAGACTGTTAAGGGAGAGGGGGAAAAAGAATCTGCAAGATCGTTTTTAGTTGATGTGAAAAAAGGGAGAATGAGAATTAGAATGAAAGTTGGATTAGCTTTGGGTGTTGTTGTCCTTTGTGTTGGGGTTGGTATGGCTGTAATGCATTTTGTGGAGAGACTTGGATGGTTGGATTCATTTTATCTGTCTGTCATGTCTGTTACAACTGTTGGATATGGGGATCAGGCCTTCAAATCTATGTCTGGTCGTATTTTTGCCTCAATTTGGTTGCTTGTATCGACACTTGCGGTTGCTCGAGCATTTCTTTATTTGGCTGAAGCTAGAGTTGATAAGAGGCACAGAAAGATGGCAAAGTGGATTCTTAGTCATGATATGACCGTGTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGATTCGTAAGTAAATCAGAATATGTAATATACAAGCTGAAGGAAATGGGGAAGGTATCAGAGAAAGACATTATGCAGATCTGCAAGAAGTTTGACAGATTAGACAATGGCAACTGTGGGAAGATAACTCTAGCTTATTTAATGGATAGCCACCACCAATGA 1272 43.16 MENEPLLSYINARRIPSTLPPRLCPLPENDDVTFPMTPTELKDRIIFGPSSPQDSLPIVEALTLSLTSPRPSSASSFQDQTTPRDPQSQSKQAWPIDPNDPWTKTKFHRSKTAPAMATINEINQATAPRPQFAKQKIVRQGCILLTLYLSLGVIIYYLNRDHFSTIETHPIVDALYFCIVTMCTIGYGDITPTSTATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLKTVKGEGEKESARSFLVDVKKGRMRIRMKVGLALGVVVLCVGVGMAVMHFVERLGWLDSFYLSVMSVTTVGYGDQAFKSMSGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRKMAKWILSHDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQICKKFDRLDNGNCGKITLAYLMDSHHQ 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23806897 23810044 + Bma025795.1 Bma07g00794 85931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00794 423 MobiDBLite consensus disorder prediction 68 96 - -
Bma07g00794 423 MobiDBLite consensus disorder prediction 68 101 - -
Bma07g00794 423 Gene3D - 267 329 - -
Bma07g00794 423 Gene3D - 330 423 - -
Bma07g00794 423 PANTHER TWO-PORE POTASSIUM CHANNEL 3 87 417 - -
Bma07g00794 423 SUPERFAMILY Voltage-gated potassium channels 141 228 - -
Bma07g00794 423 Gene3D - 118 247 - -
Bma07g00794 423 SUPERFAMILY Voltage-gated potassium channels 253 359 - -
Bma07g00794 423 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 87 417 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bma07g00794 423 SUPERFAMILY EF-hand 353 417 IPR011992 -
Bma07g00794 423 ProSitePatterns EF-hand calcium-binding domain. 366 378 IPR018247 -
Bma07g00794 423 Pfam Ion channel 268 337 IPR013099 -
Bma07g00794 423 Pfam Ion channel 143 223 IPR013099 -
Bma07g00794 423 PRINTS Two pore domain K+ channel signature 180 208 IPR003280 GO:0005267|GO:0016020|GO:0071805
Bma07g00794 423 PRINTS Two pore domain K+ channel signature 300 309 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00777 Bma-Chr7:22773607 Bma07g00794 Bma-Chr7:23806897 0 dispersed
Bma07g00794 Bma-Chr7:23806897 Bma10g01122 Bma-Chr10:35936040 3.49E-117 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00794 K05389 - jre:108990259 633.639