Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00811 ATGGCGGAACCCAATGTCAAGAGTAGCAGCGAGAGCAAGAAGAAGGATTACCCGGCTCTTCTTTTGGGCAGATTCGAGATCGGGAAGCTCCTCGGCCATGGTACCTTCGCCAAGGTCTACCACGCTAGAAACGTCAGATCGAACGAAAGCGTCGCTATAAAAGTTCTCGATAAGGAGAAGATTCTGAAGGGTGGCCTTATTGCTCATATCAAGCGGGAGATCTCGATTCTCCGCCGCGTTCGCCACCCTAATATAGTTCAGCTGATCGAGGTTATGGCGACTAAGGCCAAGATCTTCTTCGTTATGGAGTATGTTCGGGGTGGAGAGCTCTTTAAAAAGGTCGCTAAAGGTCGGTTAAAAGAAGAAGTTGCTCGGAAATATTTTCAGCAACTGATCTCCGCCGTCGGATTCTGCCACGCCCGCGGTGTTTATCACCGGGATCTTAAGCCGGAGAATCTTTTACTCGATGAGAATGGAGATCTCAAAGTCTCCGATTTTGGGTTGAGCGCAGTCTCCGATCAGATTCGGCAGGACGGTTTGTTTCACACGTTTTGTGGGACGCCAGCGTATGTTGCGCCGGAGGTTTTGGCCAGAAAAGGGTACGAAGCGGCGAAGGTGGATATTTGGTCTTGTGGGGTTATACTTTTTGTTCTTATGGCTGGCTATTTACCATTTCACGATCAAAATGTAATGGTGATGTACAAGAAAATTTACAAGGGTGAGTTTCGATGTCCGAGATGGTTCTCGCCGGAGCTAATTCGGCTCCTTTCACGTCTTCTGGATACAAATCCGGAGACCCGAATCACCATTCCTGAAATTATGGAGAACAAATGGTTCAAGAAAGGATTTAAGCATATAAAATTTTATATAGAAGATGATAAGCTTTGTAGTGTTCGAGATGAGATCGATGATGTTGATTCACTATCTGAAAAATCAATGTCGGAGTCAGAGACGGAAATGGAGCCTAGAAGGAGGATTACTTCGTTGCCTAGGCCGGCCAGTTTGAACGCATTTGACATCATATCATTTTCGCCCGGTTTTGATCTTTCGGGATTGTTCGAAGATGGGGGAGAAGAATCAAGGTTCATCTCTGGTGCCCCTGTGTCGAAAATTATATCAAAATTAGAGGAAATTGCTCAGTTGGTGAGCTTCACTGTGAGGAAGAAGGATTGCAGAGTGAGGTTGGAGGGGTCTAGAGAAGGCATAAAAGGTCCATTGACAATTGCAGCTGAGATTTTCGAATTAACTCCATCATTAGTTGTGGTGGAAGTTAAAAAGAAAGGTGGAGATAATGCAGAATATGAACACTTCTGCAACAGTGAATTGAAACCCGGATTGCAGAATTTGATGCTGGAAGTGAAGGAATCTGCAGCTTCTTCACACTTACCTTCAGATACTGAATAA 1404 45.16 MAEPNVKSSSESKKKDYPALLLGRFEIGKLLGHGTFAKVYHARNVRSNESVAIKVLDKEKILKGGLIAHIKREISILRRVRHPNIVQLIEVMATKAKIFFVMEYVRGGELFKKVAKGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNVMVMYKKIYKGEFRCPRWFSPELIRLLSRLLDTNPETRITIPEIMENKWFKKGFKHIKFYIEDDKLCSVRDEIDDVDSLSEKSMSESETEMEPRRRITSLPRPASLNAFDIISFSPGFDLSGLFEDGGEESRFISGAPVSKIISKLEEIAQLVSFTVRKKDCRVRLEGSREGIKGPLTIAAEIFELTPSLVVVEVKKKGGDNAEYEHFCNSELKPGLQNLMLEVKESAASSHLPSDTE 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25338716 25340119 + Bma025839.1 Bma07g00811 85948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00811 467 PANTHER - 18 458 - -
Bma07g00811 467 ProSiteProfiles NAF domain profile. 330 354 IPR018451 GO:0007165
Bma07g00811 467 CDD CIPK_C 336 447 - -
Bma07g00811 467 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00811 467 Gene3D Transferase(Phosphotransferase) domain 1 15 330 - -
Bma07g00811 467 Pfam NAF domain 332 388 IPR004041 GO:0007165
Bma07g00811 467 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Bma07g00811 467 SUPERFAMILY Protein kinase-like (PK-like) 21 323 IPR011009 -
Bma07g00811 467 SMART serkin_6 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00811 467 ProSiteProfiles Protein kinase domain profile. 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00811 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Bma07g00811 467 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 18 458 - -
Bma07g00811 467 CDD STKc_SnRK3 24 278 - -
Bma07g00811 467 Gene3D Kinase associated domain 1, KA1 331 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01458 Bma-Chr1:26284329 Bma07g00811 Bma-Chr7:25338716 0 dispersed
Bma07g00050 Bma-Chr7:1391637 Bma07g00811 Bma-Chr7:25338716 7.09E-132 dispersed
Bma07g00811 Bma-Chr7:25338716 Bma11g00993 Bma-Chr11:45126478 0 dispersed
Bma07g00808 Bma-Chr7:25024271 Bma07g00811 Bma-Chr7:25338716 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66617 PF00069 Pkinase 3.70E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00811 - - csv:101214053 801.586