Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00825 ATGTTGGGCTTGGAGTATCAGTCGAAGAGAGGTTATATTGGGTTGGATTATTACGGAAGGACGGTGGGGATTAAGATTATGCCTGTTGGAATTCACATGGGCCAGATTGAATCGGTGTTGAAGCAGGCAGACAAGGAGTGGAGGGTGGGGGAGCTTAAGCGGCAATTTGAGGGAAAATTCGTCATGCTCGGAGTTGACGATATGGACATTTTTAAAGGTGTTAATCTGAAGTTGTTGGCTATGGAACATATGCTAAAGCAGCACCCAAAGTGGCAAGGAAAAGCTGTTTTGGTACAGATAGCAAATCCGGCCAGGGGAGGAGGTAAAGAACTCGAAGAAATTCAGGCTGAAATAAGAGCGATCTGCGAAAGAATTAGCGACAGTTTTCGACAGCCTAATTACGAACCAATTATCTTCATTGACGGGCCAGTTTCTCTCAGTGAAAGGGCTGCATATTTCACCATTGCCGAGTGTGTGGTGGTCACAGCTGTTAGGGATGGGATGAATCTCACGCCTTATGAATACATAGTGTGCAGACAGGGCATATCAGAGTCGAGTGGGCCAAAGAAGAGCATGTTAGTAGTATCAGAGTTTATTGGATGTTCCCCTTCACTGAGTGGTGCTATTCGGGTCAATCCTTGGAACATCGAAACGACTGCTGAGGCGATGAACGAGGCAATATCAATGTCCGAGGTCGAGAAGCAGTTGAGACATGAGAAGCATTATCGACATATCAGCACCCACGACGTAGCACACTGGTCCAAGAGCTTTTTCCAAGACATAGAGAGAACTTGTAAGGACCATTTTCAGAGACGGTGCTGGGGGATTGGTTTCAGCTTCGGGTTCCGAGTAGTTGCTCTTGACCCTAATTTCCGAAAGCTCTCTAGCGATGCCATTGTATCTGCTTATATAAAGTCGAAAAGTAGAGCTATTCTTTTAGATTACAATGGAACTGTTATGCCTCAAACGTCAATCTCTAAAGCCCCGAGCCAGGAGGTTATTTCGATCATCAATACGCTCTGCAGGGACGTTAAGAATTCTGTTTTCATCGTCAGTGGACGAGGAAGAGACAGTTTGGGCAATTGGTTTTCTCCGTGCAAGAAACTTGGAATTGCTGCCGAGCATGGCTATTTTATGAGATGGTCTGCCTTTGATGAATGGGAGATTTGTGGTCAAAGTTGTGATTTTGGATGGATTCAAATAGCTGAGCCCGTTATGAAATTATATACAGAAGCCACAGATGGATCTTCGATTGAAACAAAGGAGAGTGCGTTGGTTTGGCATCACCGTGATGCAGACCCTGATTTTGGGTCTGGCCAGGCAAAGGAATTGTTGGATCACCTTGAAAGTGTGCTAGCCAATGAGCCAGTTTCAGTCAAAACTGGTCAATTCATTGTTGAAGTCAAACCACAGGGAGTGAGTAAAGGGATGGTTGCAGAAAAGATCTTCGCATCACTGGCAGAGAGTGGTAGGCTGGCTGATTTTGTGCTGTGTATTGGAGATGATAGATCGGATGAGGAAATGTTTGAGATGATTGGAAATGCAGTGGTAAACGGAATCCTCTCTCCGAATACGGCCGTTTTTGCCTGCACAGTTGGACAGAAGCCGAGCAAAGCGAAGTACTATTTGGACGACACAATGGAGGTTATAAATATGCTCGATGCCCTCGCAGAAGAAACAGATCTCTCGCCCTCACCCTCCGATGACTCCCCTTGA 1716 45.75 MLGLEYQSKRGYIGLDYYGRTVGIKIMPVGIHMGQIESVLKQADKEWRVGELKRQFEGKFVMLGVDDMDIFKGVNLKLLAMEHMLKQHPKWQGKAVLVQIANPARGGGKELEEIQAEIRAICERISDSFRQPNYEPIIFIDGPVSLSERAAYFTIAECVVVTAVRDGMNLTPYEYIVCRQGISESSGPKKSMLVVSEFIGCSPSLSGAIRVNPWNIETTAEAMNEAISMSEVEKQLRHEKHYRHISTHDVAHWSKSFFQDIERTCKDHFQRRCWGIGFSFGFRVVALDPNFRKLSSDAIVSAYIKSKSRAILLDYNGTVMPQTSISKAPSQEVISIINTLCRDVKNSVFIVSGRGRDSLGNWFSPCKKLGIAAEHGYFMRWSAFDEWEICGQSCDFGWIQIAEPVMKLYTEATDGSSIETKESALVWHHRDADPDFGSGQAKELLDHLESVLANEPVSVKTGQFIVEVKPQGVSKGMVAEKIFASLAESGRLADFVLCIGDDRSDEEMFEMIGNAVVNGILSPNTAVFACTVGQKPSKAKYYLDDTMEVINMLDALAEETDLSPSPSDDSP 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26457853 26460366 - Bma025860.1 Bma07g00825 85962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00825 571 Pfam Trehalose-phosphatase 312 546 IPR003337 GO:0003824|GO:0005992
Bma07g00825 571 Gene3D - 308 400 IPR023214 -
Bma07g00825 571 Gene3D - 438 564 IPR023214 -
Bma07g00825 571 CDD HAD_TPP 310 551 - -
Bma07g00825 571 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 266 - -
Bma07g00825 571 Gene3D Glycogen Phosphorylase B; 34 247 - -
Bma07g00825 571 SUPERFAMILY HAD-like 309 557 IPR036412 -
Bma07g00825 571 TIGRFAM T6PP: trehalose-phosphatase 306 557 IPR003337 GO:0003824|GO:0005992
Bma07g00825 571 Pfam Glycosyltransferase family 20 1 262 IPR001830 GO:0003824|GO:0005992
Bma07g00825 571 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 562 IPR001830 GO:0003824|GO:0005992
Bma07g00825 571 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 562 - -
Bma07g00825 571 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 311 517 IPR006379 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00825 Bma14g00980 CCT
Bma07g00825 Bma14g00980 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00825 Bma-Chr7:26457853 Bma14g00980 Bma-Chr14:11404314 0 dispersed
Bma11g00990 Bma-Chr11:45085561 Bma07g00825 Bma-Chr7:26457853 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00825 K16055 - cpap:110822041 991.49