Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00833 ATGGACAAGAAAGGGAGTATATTGATGCATAGGTATGAGCTCGGAAGATTGCTTGGACAAGGTACATTTGCAAAGGTTTACTATGCTAGAAACTTGAAGTCCGGCCTAGGGGTTGCGATAAAGATTATCGACAAGGAAAAGGTTTTAAGGATTGGTTTGATCGATCAAATTAAGCGCGAAATCTCCGTTATGCGACTAGTAAGGCACCCGAATGTCGTAAAACTCTACGAGGTGATGGCGAGCAAAACCAAGATTTATTTTGTGATGGAATATGTGAAGGGTGGTGAGCTTTTCAGCAGGGTTGCCAAAGGGAAGCTCAAGGAAAGTCTTGCACATAACTATTTCCAACAATTGATCCGAGCTGTCGATTATTGTCATAGCCGAGGCGTATATCACCGCGATCTTAAGCCGGAAAATCTTCTTGTCGATGAAAATGGGAATCTGAAAGTGTCGGATTTCGGGTTGAGTGCGTTGATAGAGTCAAGGAGGAAAGACGGTCTTCTCCACACGACTTGCGGTACGCCTGCATACGTAGCGCCAGAAGTGATCAATAAGAGAGGCTATGATGGAGCCAAAGCCGATATGTGGTCGTGTGGGGTCATACTCTTCGTCTTATTGGCCGGTTTTCTTCCATTCCATGATTCTAATTTGATGGAGATGTATCGAAAAAGTAGACGGGGAGATTTCAAATGTCCGCTATGGTTTCCTTCAGAAGCTCGAAAGCTTCTCTCGAAGATTCTCGATCCTAATCCAAGCTCGAGAATAAATGTAGCCAAGCTCACGGAAAACGCCTGGTTCAAGAAAGGACTGAAACAAATTAAACCATATAAATTAACAAAGGAAGAAGAAGAAGCAAATCTCAATACAGATGATCTTCCACTCACCTTTCTCGAATCTTCTGGCAGTTCTCTAAACGCGAAGAAAAGCACAAGCCCAATGAGACCGCTTTGCTTCAACGCCTTCGATATCATCTCTCTTTCGTCCGGATTCGATCTGTCTGGTTTGTTCGAAAACGACATGAATCAGAGATCACAGGAGAGGTTTACTACGACAGAACCTCCATCGACAATCGTATCGAAACTCAAGGAGATAGCCGAGACGGAGAGGTTTAAGTTCATGAAAAGGGAAGGGAAGGTGATGTTGAAGGACATGAAGGAAGGAAGAAAAGGGCAGCTGGCCATCGACGTAGATATTTACGAAGTTACCCCTTCGTTTTACGTCGTGGAGGTGATGAAAAGCGCGGGAGATACACTGGAGTACAAGCAATTCTACAACCAAGACTTGAGGCCATCGCTAGAAGATATTTGTATGGACATGAGAAGAAGGGGAGGAGCCACAACAGTAGCAACAAACAGCATAAGTTCTATTAATATTTCATCTTAA 1383 43.82 MDKKGSILMHRYELGRLLGQGTFAKVYYARNLKSGLGVAIKIIDKEKVLRIGLIDQIKREISVMRLVRHPNVVKLYEVMASKTKIYFVMEYVKGGELFSRVAKGKLKESLAHNYFQQLIRAVDYCHSRGVYHRDLKPENLLVDENGNLKVSDFGLSALIESRRKDGLLHTTCGTPAYVAPEVINKRGYDGAKADMWSCGVILFVLLAGFLPFHDSNLMEMYRKSRRGDFKCPLWFPSEARKLLSKILDPNPSSRINVAKLTENAWFKKGLKQIKPYKLTKEEEEANLNTDDLPLTFLESSGSSLNAKKSTSPMRPLCFNAFDIISLSSGFDLSGLFENDMNQRSQERFTTTEPPSTIVSKLKEIAETERFKFMKREGKVMLKDMKEGRKGQLAIDVDIYEVTPSFYVVEVMKSAGDTLEYKQFYNQDLRPSLEDICMDMRRRGGATTVATNSISSINISS 460
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27670098 27671480 - Bma025877.1 Bma07g00833 85970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00833 460 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00833 460 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Bma07g00833 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bma07g00833 460 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00833 460 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g00833 460 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 20 2 440 - -
Bma07g00833 460 CDD CIPK_C 319 432 - -
Bma07g00833 460 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Bma07g00833 460 Pfam NAF domain 315 374 IPR004041 GO:0007165
Bma07g00833 460 PANTHER - 2 440 - -
Bma07g00833 460 CDD STKc_SnRK3 11 265 - -
Bma07g00833 460 Gene3D Kinase associated domain 1, KA1 314 437 - -
Bma07g00833 460 Gene3D Transferase(Phosphotransferase) domain 1 3 313 - -
Bma07g00833 460 SUPERFAMILY Protein kinase-like (PK-like) 8 302 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00833 Bma11g00993 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01718 Bma-Chr1:53850625 Bma07g00833 Bma-Chr7:27670098 0 dispersed
Bma07g00049 Bma-Chr7:1389845 Bma07g00833 Bma-Chr7:27670098 3.56E-102 dispersed
Bma07g00833 Bma-Chr7:27670098 Bma11g00896 Bma-Chr11:34141643 2.19E-173 dispersed
Bma07g01020 Bma-Chr7:40790772 Bma07g00833 Bma-Chr7:27670098 1.57E-157 transposed
Bma11g00636 Bma-Chr11:10971667 Bma07g00833 Bma-Chr7:27670098 0 transposed
Bma02g00077 Bma-Chr2:665029 Bma07g00833 Bma-Chr7:27670098 7.28E-50 transposed
Bma11g00993 Bma-Chr11:45126478 Bma07g00833 Bma-Chr7:27670098 7.71E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66618 PF00069 Pkinase 3.40E-73 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00833 K07198 - vvi:100258329 637.106