Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00840 ATGGAGGAGTTATGTGAAAGCAGTAAAGATGAAGCGGGAATCAAGCTGTTTGGGAAGACGATCATATTCCAAAATACACAAGAAAATGAAAAGGTAATTAAGGCTGATCGGACGGAGGAGAAAGGGCAGGAAAAGATAATACCATGTCCGAGATGCAAGAGCATGGAGACAAAATTTTGTTACTTCAACAACTACAACGTTAACCAACCCAGACATTTCTGCAAAGGTTGTCAGCGATTCTGGACAGCCGGTGGCGCCCTCCGCAATGTCCCTGTCGGGGCCGGACGCCGAAAGAACAAGCCTGCTTGCGGCGGCCTCAACCGGTTTCCTGAGACTTATCTCTATGGGCTGGCGGACTGGCCTTTCATGGCGGGGGATGAAAACTTTCGGCGAGACTTGGTAATGAAGCGGCGTAGGGCGAGACTCGAGTGA 432 50.0 MEELCESSKDEAGIKLFGKTIIFQNTQENEKVIKADRTEEKGQEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRFWTAGGALRNVPVGAGRRKNKPACGGLNRFPETYLYGLADWPFMAGDENFRRDLVMKRRRARLE 143
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28305636 28306067 + Bma025888.1 Bma07g00840 85977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00840 143 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Bma07g00840 143 Pfam Dof domain, zinc finger 45 100 IPR003851 GO:0003677|GO:0006355
Bma07g00840 143 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Bma07g00840 143 PANTHER CYCLIC DOF FACTOR 2 9 116 IPR045174 GO:0003700|GO:0006355
Bma07g00840 143 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 9 116 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00840 Bma14g01000 CCT
Bma01g01447 Bma07g00840 CCT
Bma07g00840 Bma11g00999 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01447 Bma-Chr1:25011422 Bma07g00840 Bma-Chr7:28305636 4.26E-50 dispersed
Bma07g00840 Bma-Chr7:28305636 Bma14g01000 Bma-Chr14:11645662 1.00E-51 dispersed
Bma11g00999 Bma-Chr11:45383043 Bma07g00840 Bma-Chr7:28305636 4.79E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57630 PF02701 zf-Dof 9.30E-32 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00840 - - pper:18778392 173.711