Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00894 ATGGCCGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCTGAGGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTAGAAATTGTTCCTAACATGAAAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCTTCCCTCAACTGGTGGCTCAAGTCCCGTTGTGGCTAGCAATTGCTTTGAAAAAGAGAGGGAAATGTGCTATCCGGTCCCCAGAATGGATGTCTATCGAAAAGTTGACTCAGATTTTAGAAGCAGAACGAGAGTCTCAAGGAGCATTCCAGATACTACCATTTCATTATGTGGAAATCTCAAAGCTTCTTTTCGACCATGCACATAACGACATACAAGACATTTACATGGTGAGATCTCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAGGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATATTGTTCGCCCATTTGTTATCAGATCACTACAAGCAATCTATAATCATGGTAGCCCAGAGTTGGTTCCAAACCAAGAGAGAGTGTCCGGCAGAGTACAGCAAGAGCATGATCATCGTCAAAGAGTAAGTTCTTTTCTAATTTTAATATTCTCACGATCACGGCTTTTAAAATAG 666 40.39 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMKMDSLNLICGDYGPFFPQLVAQVPLWLAIALKKRGKCAIRSPEWMSIEKLTQILEAERESQGAFQILPFHYVEISKLLFDHAHNDIQDIYMVRSLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNIVRPFVIRSLQAIYNHGSPELVPNQERVSGRVQQEHDHRQRVSSFLILIFSRSRLLK 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31324054 31326081 + Bma025965.1 Bma07g00894 86031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00894 221 CDD GINS_A_psf2 66 182 - -
Bma07g00894 221 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bma07g00894 221 SUPERFAMILY GINS helical bundle-like 74 181 IPR036224 -
Bma07g00894 221 PIRSF GINS_PSF2 2 209 IPR007257 GO:0005634|GO:0006260
Bma07g00894 221 Pfam GINS complex protein 54 162 IPR021151 -
Bma07g00894 221 Gene3D - 12 77 - -
Bma07g00894 221 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 200 IPR007257 GO:0005634|GO:0006260
Bma07g00894 221 Gene3D - 78 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00599 Bma-Chr5:36215734 Bma07g00894 Bma-Chr7:31324054 6.59E-157 transposed
Bma07g00894 Bma-Chr7:31324054 Bma07g01102 Bma-Chr7:44184832 5.07E-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00894 K10733 - csv:101212053 350.132