Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00903 ATGTTTGGAGATTGTCAAGTGATGTCAAGCATGGGAGGAAGTGTAGTTTCCACCGAAAACATCTTCTCCTCTCCCATCCAAAACCCTAATTTCAACTTCCTGTCTTCCATGCCGTTTCAACATTTCCCTCCCACCACTCTTCCTAAGGAAGAAAGTGGGTTGTTGAGATCAGGAAAAGAGGAAATGGAGAGTGGGTCTGGAAGTGAACAGGTTGAAGAGAGATCGGGAAATGAGCAGGAAAGTGAGCCGCAACCTCCTAAGAAAAAACGCTACCATCGCCACACAGCTCGCCAGATCCAAGAAATGGAATCTTTATTTAAGGAATGTCCACACCCAGATGACAAGCAGAGGCTAAAACTAAGCCATGATCTTGGCCTAAAACCTCGTCAAGTAAAGTTCTGGTTCCAAAACCGAAGAACCCAGATGAAGGCACAGCAAGATCGATCTGACAATGTAATTCTTAGAGCCGAAAATGACACATTAAAGAGCGAGAACTATAGGCTTCAATCTGCTCTCCGTAATATCATCTGCCCTAATTGTGGGGGTCAAGGTCTGTTAGGGGAGCCTAGCTTGGATGAACAGCAACTTCGCCATGAAAATGCTCGTCTTAGAGAAGAGTTAGAACGATTTTGCTGTTTAACTTCGAGATACGCCACTGGACGGACTCTTCCGTCAATGGCACCGGCTTCACAACTTGTATCCCCATCCTTGGATTTAGACATGAGTATATATTCGAGGCAATTTCAAGATCAGCCTATGGTTTCTTCAGCTGATTTAATTCAAGTGCCAATGCTTCCTGCTGAAACCAGCCAGTTTCCGGAGGGAGGTCTTCTTTTAGAAGAGGAGAAGTCAATGGCCATGGAGCTTGCTTTGTCCTCCATGAACGACCTGGTGAAGATGTGCCAAACAGCTAAACCCCTGTGGATCCGAGACAGTGAAAGTGGAAGAGAAGTTTTGAATTTTGAAGAACATTTGAGAATGTTTCCATGGTCGTTGAATCTTAAACACCATTCGGATGAGTTTAGAACAGAAGCCACTCGTGATAGTGCTGTTGTTATAATGAACAGCATCACTCTAGTTGATGCATTCGTTGATGCTAATAAGTGGATGGAGCTGTTTCCATCAATTGTTGCAAGAGCCAAAACCGTTCAAGTGATATCGTCGAGTTCTTCTGGTCACGCAAGGGGCTCACTTCAACTGATGTATGCAGAATTTCAAATTCTTTCGCCTCTCGTGCCGACTCGAGAAGCGAATTTTCTTCGTTATTGCCATCAAAATGTAGCGGAGGGAAGTTGGGTGATCGTTGATTTTCCAGTCGATAGCTTTCATGACAATGTCCAGACTTCTCTTCCTAGGTATCGGAGACGACCCTCTGGCTGTATTATCCAAGATATGCCTAATGGCTACTCTAGGGTGACATGGGTGGAACATGCAGAAATAGAGGAGAAGCCAATTCATCAGATATTCAACCAGTTTGTAAGCAGTGGGATGGCCTTTGGAGCACAACGCTGGTTAGCCGTCATACAGAGACAATGCGAGAGAATTGCAAGTCTCATGGCTAGAAATATTTCAGATCTTGGAGTGATACCATCTCCAGAGGCAAGGAAGAACTTGATGAAGCTGGCGCAGAGAATGATAAGAATATTCAGTGTGAACATCAGCAGCTCCAATGGCCAATCATGGACTGCTGTATCCGACTCCCCTGATGACACAGTTCGAATCACCACCCGCAAAACCATCGAACCAGGCCAGCCTACTGGTCTTATCCTCAGCGCCGTCTCCACCACTTGGCTCCCGTTCCCCCATTACAGGGTTTTCGACCTCCTGAAAGACGAACAGCGTCGTTCTCAGTTGGAGGTTCTGTCTAATGGGAATCCTTTACATGAGGTTGCTCACATTGCCAATGGCTCCCATCCTGGAAACTCCATCTCTCTTCTTCGCATCAATGTGGCTAGCAACTCATCGCAGCATGTGGAGCTAATGCTGCAAGAGAGCTGCACCGATCAGTCGGGCAGCATCGTCGTCTACACCAACATCGACGTCGATTCCATTCAACTGGCCATGAGCGGCGAAGATCCTTCCTGCATTCCCCTTCTCCCTCTCGGCTTCGTCGTCTTCCCTGTCACCTCCGCCGCCGGAAACCCCTCAGACACACCTTCTGGAGATCCAGCCGGAGCATCACCCCCCTCCATCCCCGGCTGTCTACTCACTGTGGGCCTCCAGGTATTAGCCAGCACCATCCCCTCCGCCAAGCTCAGCCTCTCCAGTGTCACCGCCATTAACAACCACCTCTGCAACACGGTTCACCAAATCACCGCCGCTCTCACCTCCTCCCCCGACCGCTCTGACCCACTCTCTGTGCCATCTAAGTGA 2373 48.21 MFGDCQVMSSMGGSVVSTENIFSSPIQNPNFNFLSSMPFQHFPPTTLPKEESGLLRSGKEEMESGSGSEQVEERSGNEQESEPQPPKKKRYHRHTARQIQEMESLFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENDTLKSENYRLQSALRNIICPNCGGQGLLGEPSLDEQQLRHENARLREELERFCCLTSRYATGRTLPSMAPASQLVSPSLDLDMSIYSRQFQDQPMVSSADLIQVPMLPAETSQFPEGGLLLEEEKSMAMELALSSMNDLVKMCQTAKPLWIRDSESGREVLNFEEHLRMFPWSLNLKHHSDEFRTEATRDSAVVIMNSITLVDAFVDANKWMELFPSIVARAKTVQVISSSSSGHARGSLQLMYAEFQILSPLVPTREANFLRYCHQNVAEGSWVIVDFPVDSFHDNVQTSLPRYRRRPSGCIIQDMPNGYSRVTWVEHAEIEEKPIHQIFNQFVSSGMAFGAQRWLAVIQRQCERIASLMARNISDLGVIPSPEARKNLMKLAQRMIRIFSVNISSSNGQSWTAVSDSPDDTVRITTRKTIEPGQPTGLILSAVSTTWLPFPHYRVFDLLKDEQRRSQLEVLSNGNPLHEVAHIANGSHPGNSISLLRINVASNSSQHVELMLQESCTDQSGSIVVYTNIDVDSIQLAMSGEDPSCIPLLPLGFVVFPVTSAAGNPSDTPSGDPAGASPPSIPGCLLTVGLQVLASTIPSAKLSLSSVTAINNHLCNTVHQITAALTSSPDRSDPLSVPSK 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31745117 31751738 - Bma025987.2 Bma07g00903 86040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00903 790 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Bma07g00903 790 MobiDBLite consensus disorder prediction 53 87 - -
Bma07g00903 790 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Bma07g00903 790 SMART HOX_1 86 149 IPR001356 GO:0003677
Bma07g00903 790 SUPERFAMILY Bet v1-like 280 516 - -
Bma07g00903 790 SUPERFAMILY Bet v1-like 542 771 - -
Bma07g00903 790 MobiDBLite consensus disorder prediction 42 94 - -
Bma07g00903 790 ProSiteProfiles START domain profile. 279 517 IPR002913 GO:0008289
Bma07g00903 790 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 52 781 IPR042160 -
Bma07g00903 790 Gene3D - 72 156 - -
Bma07g00903 790 SMART START_1 288 514 IPR002913 GO:0008289
Bma07g00903 790 PANTHER - 52 781 - -
Bma07g00903 790 Pfam START domain 288 514 IPR002913 GO:0008289
Bma07g00903 790 SUPERFAMILY Homeodomain-like 75 146 IPR009057 -
Bma07g00903 790 CDD homeodomain 88 146 IPR001356 GO:0003677
Bma07g00903 790 Gene3D - 331 513 IPR023393 -
Bma07g00903 790 CDD START_ArGLABRA2_like 283 513 - -
Bma07g00903 790 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00903 Bma-Chr7:31745117 Bma12g01265 Bma-Chr12:45678632 0 dispersed
Bma07g00903 Bma-Chr7:31745117 Bma02g01326 Bma-Chr2:55771471 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57633 PF01852 START 3.90E-44 CL0209 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00903 - - zju:107431192 1181.39