Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00915 ATGTTGCCGTTGAAGGAAAACGATTCGGAGGATATGGTGCTCGCCGGAGTACTCCGAGATGCTGTCAGTTTCGGGTGGGTTCCGTCGCTCAATTCTGCATCAATGGCGAGTGGCGTTTTTGAAACTTCGCGGGTAAAACCCGACGAGGAACTGGAGAGTCTTTCGCTGGTGTTTGGGGAAGATCGGTCGCCAGCGCCGCCTGCGGCTCCGTCCAAGGGGAAGCACTACAGAGGAGTTCGCCAACGACCTTGGGGAAAATTCGCGGCGGAGATCCGTGATCCAGCGAAAAACGGCGCCAGAGTCTGGCTCGGGACGTTCGAGACGGCGGAGGATGCGGCCCTGGCTTATGACAGAGCCGCCTACAAGATGCGCGGCTCGAAAGCGCTTCTGAACTTTCCGCTTCGAGTCAATTCAGGGGAGCCCGACCCGGTTAGAGTGACCTCAAAACGGTCCTCATCGGGCCGATCCCCATCATCGCCAAAAGGGTCGCCGAAACGGCGGAAGACGACCGACAATACAGCAGCTCAGCCAATTTTGGCGACGCTACCGCCGTTTGAAGAAGGAAAAGAAATGGAGGTGGCATTACGAACCAGTCTTGTTGAATACTCGACGCTCGCCTAA 621 57.0 MLPLKENDSEDMVLAGVLRDAVSFGWVPSLNSASMASGVFETSRVKPDEELESLSLVFGEDRSPAPPAAPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYKMRGSKALLNFPLRVNSGEPDPVRVTSKRSSSGRSPSSPKGSPKRRKTTDNTAAQPILATLPPFEEGKEMEVALRTSLVEYSTLA 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32987599 32988219 - Bma026016.1 Bma07g00915 86052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00915 206 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Bma07g00915 206 SUPERFAMILY DNA-binding domain 75 135 IPR016177 GO:0003677
Bma07g00915 206 PANTHER BNAANNG21280D PROTEIN 2 171 - -
Bma07g00915 206 MobiDBLite consensus disorder prediction 144 160 - -
Bma07g00915 206 CDD AP2 74 133 IPR001471 GO:0003700|GO:0006355
Bma07g00915 206 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Bma07g00915 206 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Bma07g00915 206 Gene3D AP2/ERF domain 74 136 IPR036955 GO:0003700|GO:0006355
Bma07g00915 206 MobiDBLite consensus disorder prediction 137 185 - -
Bma07g00915 206 PANTHER DNA-BINDING DOMAIN 2 171 IPR044808 GO:0003700|GO:0009873
Bma07g00915 206 MobiDBLite consensus disorder prediction 60 79 - -
Bma07g00915 206 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Bma07g00915 206 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01215 Bma-Chr5:51556530 Bma07g00915 Bma-Chr7:32987599 2.37E-32 dispersed
Bma07g00915 Bma-Chr7:32987599 Bma12g00674 Bma-Chr12:27964462 5.73E-69 dispersed
Bma12g01182 Bma-Chr12:44646710 Bma07g00915 Bma-Chr7:32987599 7.21E-32 dispersed
Bma07g00915 Bma-Chr7:32987599 Bma07g00916 Bma-Chr7:33008284 1.34E-148 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57634 PF00847 AP2 4.00E-15 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00915 K09286 - csv:101203663 211.846