Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00916 ATGTATGGACAGAGCTACGGGACCGAGTCGGATTTTGGTTTGTTTGAAGTTGTTCGCCGGCATTTAATCGACGAGCCAGAGGCTCGGCGAGGCTGTGAATTGGGGGTTACCCCGGTTTTCTGCCGGAGCTCCAGTTTTGGAAGCGTGTACCCGTGTTTGACTGAGAGTTGGGGCATGTTGCCGTTGAAGGAAAACGATTCGGAGGATATGGTGCTCGCCGGAGTACTCCGAGATGCTGTCAGTTTCGGGTGGGTTCCGTCGCTCAATTCTGCATCAATGGCGAGTGGCGTTTTTGAAACTTCGCGGGTAAAACCCGACGAGGAACTGGAGAGTCTTTCGCTGGTGTTTGGGGAAGATCGGTCGCCAGCGCCGCCTGCGGCTCCGTCCAAGGGGAAGCACTACAGAGGAGTTCGCCAACGACCTTGGGGAAAATTCGCGGCGGAGATCCGTGATCCAGCGAAAAACGGCGCCAGAGTCTGGCTCGGGACGTTCGAGACGGCGGAGGATGCGGCCCTGGCTTATGACAGAGCCGCCTACAAGATGCGCGGCTCGAAAGCGCTTCTGAACTTTCCGCTTCGAGTCAATTCAGGGGAGCCCGACCCGGTTAGAGTGACCTCAAAACGGTCCTCATCGGGCCGATCCCCATCATCGCCAAAAGGGTCGCCGAAACGGCGGAAGACGACCGACAATACAGCAGCTCAGCCAATTTTGGCGACGCTACCGCCGTTTGAAGAAGGAAAAGAAATGGAGGTGGCATTACGAACCAGTCTTGTTGAATACTCGACGCTCGCCTAA 795 56.48 MYGQSYGTESDFGLFEVVRRHLIDEPEARRGCELGVTPVFCRSSSFGSVYPCLTESWGMLPLKENDSEDMVLAGVLRDAVSFGWVPSLNSASMASGVFETSRVKPDEELESLSLVFGEDRSPAPPAAPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYKMRGSKALLNFPLRVNSGEPDPVRVTSKRSSSGRSPSSPKGSPKRRKTTDNTAAQPILATLPPFEEGKEMEVALRTSLVEYSTLA 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33008284 33009078 - Bma026017.1 Bma07g00916 86053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00916 264 PRINTS Ethylene responsive element binding protein signature 157 173 IPR001471 GO:0003700|GO:0006355
Bma07g00916 264 PRINTS Ethylene responsive element binding protein signature 134 145 IPR001471 GO:0003700|GO:0006355
Bma07g00916 264 SUPERFAMILY DNA-binding domain 133 193 IPR016177 GO:0003677
Bma07g00916 264 MobiDBLite consensus disorder prediction 195 243 - -
Bma07g00916 264 CDD AP2 132 191 IPR001471 GO:0003700|GO:0006355
Bma07g00916 264 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700|GO:0006355
Bma07g00916 264 PANTHER BNAANNG21280D PROTEIN 24 229 - -
Bma07g00916 264 MobiDBLite consensus disorder prediction 118 137 - -
Bma07g00916 264 MobiDBLite consensus disorder prediction 202 218 - -
Bma07g00916 264 PANTHER DNA-BINDING DOMAIN 24 229 IPR044808 GO:0003700|GO:0009873
Bma07g00916 264 SMART rav1_2 133 197 IPR001471 GO:0003700|GO:0006355
Bma07g00916 264 Pfam AP2 domain 133 183 IPR001471 GO:0003700|GO:0006355
Bma07g00916 264 Gene3D AP2/ERF domain 132 194 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00916 Bma-Chr7:33008284 Bma12g00674 Bma-Chr12:27964462 6.03E-68 dispersed
Bma07g00915 Bma-Chr7:32987599 Bma07g00916 Bma-Chr7:33008284 1.34E-148 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57635 PF00847 AP2 6.10E-15 CL0081 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00916 K09286 - csv:101203663 279.256