Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00930 ATGACGGACTATCGATTAGCGACGCCGGCTATGAATCTTTGGAGTGACGAGAATGCTTCTGTCATGGATGCTTTCCTGAATTCTGATCTTTCTTCTTTCTGGGCTCCGCCTCCTCAAAACCACCCTTCCTCCGCCTCCATCTGTACTCCTCTCCCGCAGCCGTCAGCTGCGGTTTTCAACCAGGAAAGTTTGCAGCAGCGTCTGCAGGCGCTGATCGAGGGACCTCGCCATATCTGGACTTACGCAATCTTCTGGCAGTCCTCTTACGATTACTCCGGCCCATCGGTTTTAGGATGGGGCGATGGGTATTACAAAGGGGAGGAAGATAGAGGCACGGCCAAAAGCATTGCAGCTTCTTCTGCGGCAGAGCAGGAGCACCGGAAAAAGGTTCTCCGCGATCTCAACTCACTGATTTCAGGATCCACCTTCGCTTCAGACGACGCCGTCGATGAAGTTGTCACCGACACCGAGTGGTTCTTCTTGGTTTCGATGACCCAGTCTTTTGTCAACGGCAGTGGGTTGCCCGGTCAGGCTTTGTTCAATTCCCGGCCGGTGTGTGTTTCTGGGTCAGACCGACTCGCGGCATCTACCTGCGAACGCGCACGGCAAGGTCAGACCTTCGGGTTACAGACGATGATATGTATACCCTCTGCTAATGGAGTAGTTGAATTAGGGTCGACGGAGGTCGTCTTACAGAGCTCCGATCTTATTAATAAAGTTAGGGTTTTGTTCGATTTCAATAATCTGGAGGTTGGTTCATGGCCCATGGCCGGAGCTGACCATGCCGAAACAGACCCATCTGCACTCTGGCTAACCGATCCTTCTGAAATCAAAGAACCAGCGAGCTCTATTCCACCTTCAATGGCCCCTTCTTCAACTTCCCATCCAGCTTCTAAGCCAATCCACTTCGATAATCCAAGGCCGTCGAGTTTAGCGGACATTCCAGCCAATCAGCAGTCAACACAGATGCAGACGCAAACCTTCTTCTCAAGAGAACTGAATTTCTCCAACTACGGATACGAAGTAACCAGCGCAAAGAACGGAAATTCCCATCCGATGAAGCCCGAATCGGGGGAGATTCTCAACTTCGGAGAGAGTAAAAAAAGTTCCTACGGGAACGGCAGCTTGTTTTCCGGCCATACTCAGGTTGTTACCGAGGAGCCCGTAAACAAGAAGAGGTCGCCGGCTTCCCGAGGAAGTAACGAAGATGGGATGATGTCTTTTACTTCCGGCGTGATTCTGCCGTCTTCCGGTGGAGTAAAGTCAAGCGGCGGTGGAGTGGATTCCGACCATTCCGATCTCGAAGCTTCAGTAGTTCGTGAGGCAGACAGTAGCAGAGTGGTGGAACCGGAGAAGAAGCCTCGGAAAAGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTTGAAGCAGAGAGACAAAGAAGAGAGAAGCTAAACCAGAGATTCTACGCTCTCAGAGCTGTAGTTCCGACCGTGTCGAAAATGGACAAAGCTTCTCTTCTCGGCGACGCCATCTCCTACATCAACGATCTCAAATCCAAGCTCAAAACTACAGAATCAGATAATGAAGAGTTGCAGACACAACTAGATTTAGTGAAAAAGGAGTTGGACGACAAAGACAGTCGTCACTCAGGATCAAAACAATCTCCTCCTAATCAAGATCTGAAGATCTCAAATCAAAACGGAGGTAAACTCACAGAAATGGACATCGATGTTAAAATAATCGGCTGGGATGCTATGATCCGAATCCAATGCAGCAAGGAAAACCACCCAGCAGCTACAGTAATGGCGGCACTGAAGGAACTAGACTTGGAAGTTCACCACGCCAGCATGTCAGTGGTGAATAACCTGATGATCCAACAAGCTACAGTGAAGATGGGAAGTAGATTTTACACTCAAGAACAGCTCAAGATCGCTCTGTCAACAAAATTAAGCAACACCCGATGA 1959 49.41 MTDYRLATPAMNLWSDENASVMDAFLNSDLSSFWAPPPQNHPSSASICTPLPQPSAAVFNQESLQQRLQALIEGPRHIWTYAIFWQSSYDYSGPSVLGWGDGYYKGEEDRGTAKSIAASSAAEQEHRKKVLRDLNSLISGSTFASDDAVDEVVTDTEWFFLVSMTQSFVNGSGLPGQALFNSRPVCVSGSDRLAASTCERARQGQTFGLQTMICIPSANGVVELGSTEVVLQSSDLINKVRVLFDFNNLEVGSWPMAGADHAETDPSALWLTDPSEIKEPASSIPPSMAPSSTSHPASKPIHFDNPRPSSLADIPANQQSTQMQTQTFFSRELNFSNYGYEVTSAKNGNSHPMKPESGEILNFGESKKSSYGNGSLFSGHTQVVTEEPVNKKRSPASRGSNEDGMMSFTSGVILPSSGGVKSSGGGVDSDHSDLEASVVREADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPTVSKMDKASLLGDAISYINDLKSKLKTTESDNEELQTQLDLVKKELDDKDSRHSGSKQSPPNQDLKISNQNGGKLTEMDIDVKIIGWDAMIRIQCSKENHPAATVMAALKELDLEVHHASMSVVNNLMIQQATVKMGSRFYTQEQLKIALSTKLSNTR 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 34124281 34126239 + Bma026040.1 Bma07g00930 86067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00930 652 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 64 244 IPR025610 -
Bma07g00930 652 Gene3D - 458 545 IPR036638 GO:0046983
Bma07g00930 652 PANTHER MYC 51 649 IPR045084 GO:0003700|GO:0006355
Bma07g00930 652 MobiDBLite consensus disorder prediction 400 417 - -
Bma07g00930 652 Pfam Helix-loop-helix DNA-binding domain 470 515 IPR011598 GO:0046983
Bma07g00930 652 CDD bHLH_AtAIB_like 463 539 - -
Bma07g00930 652 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 466 515 IPR011598 GO:0046983
Bma07g00930 652 PANTHER TRANSCRIPTION FACTOR MYC2 51 649 - -
Bma07g00930 652 Coils Coil 512 546 - -
Bma07g00930 652 SMART finulus 472 521 IPR011598 GO:0046983
Bma07g00930 652 MobiDBLite consensus disorder prediction 383 477 - -
Bma07g00930 652 MobiDBLite consensus disorder prediction 540 566 - -
Bma07g00930 652 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 469 535 IPR036638 GO:0046983
Bma07g00930 652 MobiDBLite consensus disorder prediction 285 299 - -
Bma07g00930 652 MobiDBLite consensus disorder prediction 277 318 - -
Bma07g00930 652 MobiDBLite consensus disorder prediction 550 566 - -
Bma07g00930 652 MobiDBLite consensus disorder prediction 433 477 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00930 Bma14g00153 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00930 Bma-Chr7:34124281 Bma12g00210 Bma-Chr12:2755073 1.74E-87 dispersed
Bma12g00073 Bma-Chr12:1284561 Bma07g00930 Bma-Chr7:34124281 2.48E-20 dispersed
Bma15g00574 Bma-Chr15:6667280 Bma07g00930 Bma-Chr7:34124281 1.31E-18 dispersed
Bma15g00592 Bma-Chr15:7468991 Bma07g00930 Bma-Chr7:34124281 1.31E-18 dispersed
Bma15g01091 Bma-Chr15:43462756 Bma07g00930 Bma-Chr7:34124281 3.29E-18 dispersed
Bma14g00153 Bma-Chr14:2131378 Bma07g00930 Bma-Chr7:34124281 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57638 PF14215 bHLH-MYC_N 1.70E-51 CL0161 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00930 K13422 - vvi:100250607 864.374