Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g00944 ATGGCTGGTTTGGATTTGGGAAATCGCTATGTTCATCCGCTGCACTTACCAGACTTGCACCTCCAAAGACTACCTCAATCTCACCCGGCATCAAATTCCGAGGAAGATCTCAATCGAGGCACTCATTTTTCAGTTGAAGATGGATCTCACCAAGCCATAGACAGCGCCGGAGATGTGGTCGGTCGCAGGCCTCGTGGGCGACCACCCGGCTCCAAAAACAAGCCTAAACCGCCGGTTATTATTACACGGGAGAGTGCCAACACTCTCAGAGCTCATATTCTCGAGGTTGGGAATGGCACTGATGTGTTCGACTGTGTCGCTACCTACGCTCGCCGGAGGCAGCGGGGGATCTGCATCTTGAGCGGGAGTGGGATGGTGACAAACGTCAGCCTGAGACAACCGACGGCTGCTGGTGCCGTCGTAACCCTACATGGGACGTTTGAGATACTATCGCTTTCAGGTTCCTTTTTGCCGCCGCCAGCTCCTCCGGGAGCCACGAGTCTGACTATATTTTTGGCTGGCGGTCAAGGGCAGGTGGTTGGAGGAAGTGTCGTGGGGGAGTTGATTGCGGCTGGGCCTGTAATCCTTATCGCTGCATCGTTTACTAACGTGGCCTACGAGAGACTGCCGTTGGATGAGGAGGAGGATCTTCCTGTTCAGGAGTCTGATTCTCCGGCAGCCGGAGCTGGAAGTGGTATTGGCGTAGGGAATAACCCATTTCAGGATCCTTCTTCTGGGCTTCCTTTCCTCAATCTGCCACTTAATTTTCCGAACGTTCAGCTTCCCGGCGATGGGTGGGCAACTAATTCAGCAGCTCGTCCATTTTGA 828 53.99 MAGLDLGNRYVHPLHLPDLHLQRLPQSHPASNSEEDLNRGTHFSVEDGSHQAIDSAGDVVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGTDVFDCVATYARRRQRGICILSGSGMVTNVSLRQPTAAGAVVTLHGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELIAAGPVILIAASFTNVAYERLPLDEEEDLPVQESDSPAAGAGSGIGVGNNPFQDPSSGLPFLNLPLNFPNVQLPGDGWATNSAARPF 275
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 35383210 35384037 - Bma026072.1 Bma07g00944 86081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g00944 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 274 - -
Bma07g00944 275 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 203 IPR005175 -
Bma07g00944 275 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 218 - -
Bma07g00944 275 MobiDBLite consensus disorder prediction 214 240 - -
Bma07g00944 275 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 274 IPR014476 GO:0003680
Bma07g00944 275 MobiDBLite consensus disorder prediction 24 80 - -
Bma07g00944 275 CDD DUF296 90 173 IPR005175 -
Bma07g00944 275 ProSiteProfiles PPC domain profile profile. 86 223 IPR005175 -
Bma07g00944 275 Gene3D - 89 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01246 Bma-Chr6:49618595 Bma07g00944 Bma-Chr7:35383210 5.01E-99 dispersed
Bma07g00944 Bma-Chr7:35383210 Bma08g01008 Bma-Chr8:49104811 3.20E-69 dispersed
Bma07g00944 Bma-Chr7:35383210 Bma02g01165 Bma-Chr2:53776721 1.40E-118 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g00944 - - jre:108994023 343.584