Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma07g00999 | ATGGACGCAGGTGATAAAGGCCAGGCTGTGGATGTGAGGTCAGTCGTCGAAGCAGTCGCTGCCGGTGGCGATTGCGATGTTCCAATCTACGTGGTCGAAAGCCTTTGCATGCGCTGTAGAGAAAACGGGATAACAAGATTTCTTTTAACTATAATTCCACACTTCAGGAAGATATTGTTGTCGGCCTTTGAATGTACACATTGTGGTGAGAGGAATAACGAGGTTCAATTTGCTGGAGAGATTCAACCACGTGGATGCTGCTACATTTTGGAGGTCTCCGCTCGCGATTTGAAGATGCTTAATCGACAAGTAGTGAAAGCTGAGTCTGCTACAATTAGGATTCCTGATTTGGATTTTGAGATTCCTACTGAGGCTCAACGAGGAACTCTTTCTACGGTGGAAGGGATACTAGCTAGAGCAAAGGATGAATTGCAGGCTCTTCAAGAAGAGCGTAGGAGATTGGATCCTCAAACCGCTGAAGCAATTGATAAGTTTTTGTTGAAATTAAAAGCTTGTGCGATGGGAGATACATCATTCACTTTCATCTTGGATGATCCGGCTGGAAACAGCTTCATTGAGAATCCATATGCTCCATCGTCGGACCCATCATTGAGTGTTAAGTTCTATGAGCGAACTCCAGAGCAACAAGCATTATTGGGATATCTCGTTGACTCATTTGAATCAAGAGAAGGTGCTAATGGTGCATTATCAGATGAAAAAGCTGCTGTTTCAGAAATCGGAACATTGCCAACTTCATTAGTTGGAGCACCAGCTGGCCATCGAGCAATTGCTCAGAGTAATAGCGCAGAGATTGCGGAAGCTTTATTTCGTTACACTGCTCCTGAAGAAGTGATGACTTTTCCATCAACATGTGGGACTTGTGCTACCAGCTGCGAGACTCGAATGTTTGTTACAAACATACCTTACTTTCAAGAAGTGATTGTCATGGCATCCACCTGTGATTCATGTGGTTACCGTAATTCTGAGTTGAAGCCTGGTGGTCGAATTCCCGAAAAAGGAAAAATAATTACTCTCCAAGTAAAGAGCTCTAAGGATCTTAGTCGTGATGTTATAAAGTCAGATACTGCTAGTGTAAGAGTTCCGGATCTGGACTTGGAGCTGGCTAGTGGCACTCTTGGAGGAGTTGTTACAACGGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTGAGAAAGTGCATGGATTTACCTTCGGAGACAGTCTTGATGATGATAAAAAGAGCAAGTGGCAAGATTTTGGAAGGAGGTTAAACAAGGTATTGCATATTTATAATTTTCAATAA | 1305 | 42.76 | MDAGDKGQAVDVRSVVEAVAAGGDCDVPIYVVESLCMRCRENGITRFLLTIIPHFRKILLSAFECTHCGERNNEVQFAGEIQPRGCCYILEVSARDLKMLNRQVVKAESATIRIPDLDFEIPTEAQRGTLSTVEGILARAKDELQALQEERRRLDPQTAEAIDKFLLKLKACAMGDTSFTFILDDPAGNSFIENPYAPSSDPSLSVKFYERTPEQQALLGYLVDSFESREGANGALSDEKAAVSEIGTLPTSLVGAPAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGTCATSCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRIPEKGKIITLQVKSSKDLSRDVIKSDTASVRVPDLDLELASGTLGGVVTTVEGLITKISESLEKVHGFTFGDSLDDDKKSKWQDFGRRLNKVLHIYNFQ | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 38991888 | 38997903 | + | Bma031393 | Bma07g00999 | 86136 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma07g00999 | 434 | Pfam | ZPR1 zinc-finger domain | 289 | 429 | IPR004457 | GO:0008270 | |
Bma07g00999 | 434 | Pfam | ZPR1 zinc-finger domain | 34 | 193 | IPR004457 | GO:0008270 | |
Bma07g00999 | 434 | PANTHER | ZINC FINGER PROTEIN ZPR1 | 1 | 430 | IPR040141 | - | |
Bma07g00999 | 434 | TIGRFAM | ZPR1_znf: ZPR1 zinc finger domain | 36 | 216 | IPR004457 | GO:0008270 | |
Bma07g00999 | 434 | TIGRFAM | ZPR1_znf: ZPR1 zinc finger domain | 290 | 427 | IPR004457 | GO:0008270 | |
Bma07g00999 | 434 | Gene3D | ZPR1, zinc finger domain | 279 | 334 | IPR042452 | - | |
Bma07g00999 | 434 | Gene3D | ZPR1, zinc finger domain | 25 | 79 | IPR042452 | - | |
Bma07g00999 | 434 | Coils | Coil | 130 | 157 | - | - | |
Bma07g00999 | 434 | PANTHER | ZPR1 ZINC-FINGER DOMAIN PROTEIN | 1 | 430 | - | - | |
Bma07g00999 | 434 | Gene3D | ZPR1, A/B domain | 80 | 221 | IPR042451 | - | |
Bma07g00999 | 434 | Gene3D | ZPR1, A/B domain | 335 | 432 | IPR042451 | - | |
Bma07g00999 | 434 | SMART | zpr1 | 289 | 432 | IPR004457 | GO:0008270 | |
Bma07g00999 | 434 | SMART | zpr1 | 34 | 194 | IPR004457 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma04g01229 | Bma-Chr4:35692039 | Bma07g00999 | Bma-Chr7:38991888 | 1.14E-21 | dispersed | |
Bma07g00993 | Bma-Chr7:38837991 | Bma07g00999 | Bma-Chr7:38991888 | 2.28E-19 | proximal | |
Bma07g00999 | Bma-Chr7:38991888 | Bma07g01002 | Bma-Chr7:39708054 | 2.49E-06 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma07g00999 | K06874 | - | csv:101208000 | 647.506 |