Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01020 ATGATGGAGCAGATCAAGAGGGAAATCTCTGTGATGAAGATGGTGAAGCATCCCAACATCGTTGAGCTTCACGAGATTATGGCGAGTAAAACCAATATCTATTTTTCCATGGAGCTCGTCCGTGGCGGCGAGCTCTTCGCCAAGGTCGTCAAAGGCCGCCTGAGAGAAAACGTCGCCAGAGTCTATTTCCACCAGCTTATATCGGTGATAGATTTTTGCCACAGTCGCGGTGTTTTCCACCGCGATTTGAAGCCGGAGAATCTTCTTCTCGACGAAGATGGAAACATCAAAGTCACCGATTTCGGACTCAGCGCCGTCTCCGACCACTTGAAGGACGGATTACACCACACAACCTGCGGAACCCCGGCTTACGTTGCGCCGGAAGTGATCGGAAAAAAGGGATACGACGGAGCCAAAGCCGATCTCTGGTCTTGCGGCGTCATTCTCTACGTGCTCCTCGCTGGATTTCTTCCTTTCCAGGACGATAATCTGGTCACAATGTACAGAAAAATTTACAAGGGCGACTTCAAATGTCCGCCATGGTTCTCTGCTGAAGCTCGAAGGCTGATAATCAAGCTTCTAGACCCGAACCCGACGACCCGGATAACTATAGCGAAGATCATGGACTCCTCCTGGTTTAAGAGATCGGTTCCAAAATCCATAATCACGAAAGAGGAGCAGGAATTGGGCAAAAAATGCGACAAAATAATGAACGAGCGAGAGACCTTAAATGCATTTCACATAATATCGTTATCCGAGGGGTTCGACCTATCGCCATTATTCGAGGAGAATAAGAGGAAGGAGAAAGTGGAGATGAGATTTGCGACGACGAGGCCGGCGAGTAGTGTGATATCAAAGCTGGAGGAGGTTGCAGAGGCGGTGAAGTTCGACGTCCAGAAGAGCAACTCCATGGTTAGGTTGCAGGGGAAGGAGCGAGGAAGAAAGGGGAAGTTGGCAATAGAGGCGGAGTTATTCGCAGTGGCGCCGTCGTTTCTGGTGGTGGAGGTGAAGAAGGACAATGGGGACACGTGGGAGTACAACCAGTTCTGCAGCAACAAGCTTCGTCCTGCTCTGAAAGAAGTTCTCTGGACTTCTCCTCCAGAAAAGTCCATGCCTGCTGTTGCATGA 1128 50.0 MMEQIKREISVMKMVKHPNIVELHEIMASKTNIYFSMELVRGGELFAKVVKGRLRENVARVYFHQLISVIDFCHSRGVFHRDLKPENLLLDEDGNIKVTDFGLSAVSDHLKDGLHHTTCGTPAYVAPEVIGKKGYDGAKADLWSCGVILYVLLAGFLPFQDDNLVTMYRKIYKGDFKCPPWFSAEARRLIIKLLDPNPTTRITIAKIMDSSWFKRSVPKSIITKEEQELGKKCDKIMNERETLNAFHIISLSEGFDLSPLFEENKRKEKVEMRFATTRPASSVISKLEEVAEAVKFDVQKSNSMVRLQGKERGRKGKLAIEAELFAVAPSFLVVEVKKDNGDTWEYNQFCSNKLRPALKEVLWTSPPEKSMPAVA 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 40790772 40791899 - Bma026205.1 Bma07g01020 86157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01020 375 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 370 - -
Bma07g01020 375 CDD CIPK_C 244 359 - -
Bma07g01020 375 Gene3D Phosphorylase Kinase; domain 1 1 44 - -
Bma07g01020 375 Gene3D Kinase associated domain 1, KA1 241 364 - -
Bma07g01020 375 SMART serkin_6 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01020 375 Gene3D Transferase(Phosphotransferase) domain 1 45 240 - -
Bma07g01020 375 Pfam Protein kinase domain 3 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01020 375 PANTHER - 1 370 - -
Bma07g01020 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 78 90 IPR008271 GO:0004672|GO:0006468
Bma07g01020 375 Pfam NAF domain 241 300 IPR004041 GO:0007165
Bma07g01020 375 SUPERFAMILY Protein kinase-like (PK-like) 2 225 IPR011009 -
Bma07g01020 375 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01020 375 ProSiteProfiles NAF domain profile. 238 262 IPR018451 GO:0007165
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01020 Bma-Chr7:40790772 Bma11g00636 Bma-Chr11:10971667 0 dispersed
Bma07g01020 Bma-Chr7:40790772 Bma07g00833 Bma-Chr7:27670098 1.57E-157 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66623 PF00069 Pkinase 9.80E-60 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01020 - K07198 mnt:21393291 626.32