Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01046 CTAGGTGAAGGGTTGAAATCGGAGGGGCTTGAAATGGATTTTGGGTTTGGTGAAGAGAGAGGTAAGATACCTTTTTCTTATTCTTCTTCCTCTTCATCTCCTTCGTCTTCTTCGCAGTACAAAACGGCGAATCTGATATCTCTAGGCAATAACCAGAGCTGGGAGTCTCATATTTTCGATGAGTACCAGCAGCAGCCGAGAGGGCTTGAGCTGATGGCCGGAAACGATGAAGTAGTGAGAAGGTCTGGAGGTGCAGGCGGCCATGGAAGTAGCGCGAGCTTTTGTATAGAGAAGGAACACATGTTCGACAAGGTTGTCACTCCCAGCGACGTTGGAAAACTGAACCGGCTCGTAATTCCGAAACAGCACGCAGAAAAGTATTTTCCTCTCGATTCATCCACAAACGAGAAAGGTCTCCTCTTGAATTTCGAAGATCGGAATGGAAAGTCATGGAGATTTCGATACTCGTACTGGAATAGCAGCCAGAGCTACGTTATGACAAAAGGGTGGAGTCGGTTTGTGAAGGAGAAGAAGCTGGACGCCGGCGACATTGTTTCGTTCCAGCGGGGAGTTGGGGAGGCGGGAAAAGATAGTCTCTATATTGACTGGCAGCGCCGCCCTGATGCGCCCCAACGGGCAGCGGCCCTAATTCCGCACCAATTCTCTTTCCACCCCCACCACCAGTCAATCCCTTGGAGCCCCTTGCTCTTCAGTTCTATGGCGGCTGCAACGTCCTTGTCTTCCCCACAGGACCACTTGCACTTGTCGCACCTAAACAGCAATGTCATCCACAGAGTTATCTCCACCGGTTACGGCGGTATGGTAAACCCACACCCACATCCCCCACCAAACTGCGCAAACGGATCAATTCTTTACTGCAGGTCGGCGCCGGGTGGGTCACAAGGACAGCCGTTTGAGACGGCGGCTCACGTTCCACGTGGGGGTGGAGTGGAACCGATGGTGTTTGATTCCGTTCCGGTGGTCCATGGGAAAGCGGCTGCTAAGAAACTCCGGCTGTTTGGTGTTAACATGGAGTGCCCAGTGTCGGAATCCGACGGCCGCCGGGAGTCAGAATCTCATCTTCCGCCCAGTTTTTCTTCTTCTGGTTCTCAACAGTCTCTCCAACTGAGGCTCTATAATGGTACTCCAATACCCACCCATCTTCTCAACGAAGACAACCCTACTACCATGTCCTTAAATTTCAACATTTGA 1212 51.49 LGEGLKSEGLEMDFGFGEERGKIPFSYSSSSSSPSSSSQYKTANLISLGNNQSWESHIFDEYQQQPRGLELMAGNDEVVRRSGGAGGHGSSASFCIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGEAGKDSLYIDWQRRPDAPQRAAALIPHQFSFHPHHQSIPWSPLLFSSMAAATSLSSPQDHLHLSHLNSNVIHRVISTGYGGMVNPHPHPPPNCANGSILYCRSAPGGSQGQPFETAAHVPRGGGVEPMVFDSVPVVHGKAAAKKLRLFGVNMECPVSESDGRRESESHLPPSFSSSGSQQSLQLRLYNGTPIPTHLLNEDNPTTMSLNFNI 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42169312 42170523 + Bma026242.1 Bma07g01046 86183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01046 403 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 69 367 IPR044800 GO:0003700
Bma07g01046 403 MobiDBLite consensus disorder prediction 348 373 - -
Bma07g01046 403 Pfam B3 DNA binding domain 102 206 IPR003340 GO:0003677
Bma07g01046 403 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 69 367 - -
Bma07g01046 403 CDD B3_DNA 100 189 IPR003340 GO:0003677
Bma07g01046 403 ProSiteProfiles B3 DNA-binding domain profile. 102 207 IPR003340 GO:0003677
Bma07g01046 403 Gene3D - 95 214 IPR015300 -
Bma07g01046 403 SUPERFAMILY DNA-binding pseudobarrel domain 99 190 IPR015300 -
Bma07g01046 403 SMART B3_2 102 207 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g01046 Bma14g00089 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01046 Bma-Chr7:42169312 Bma10g00112 Bma-Chr10:1056001 4.07E-52 dispersed
Bma14g00711 Bma-Chr14:7769028 Bma07g01046 Bma-Chr7:42169312 1.81E-29 transposed
Bma14g00089 Bma-Chr14:1257805 Bma07g01046 Bma-Chr7:42169312 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
57651 PF02362 B3 4.00E-29 CL0405 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01046 - - pop:18103453 345.51