Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01058 ATGCAGGAATCTGAGGGTGGTGGTACGCCGACAGCGTCGGCACCGGCGACTCCAATATCGCCGGGGGGTCCGCTGTTCCCGTCGTTCCGAGTGGATTCGATGTCGTATGATCGGAAGCCAATGCCGGGGTGCAAGTGCTTCCCAGTTAACGCTCCCACGTGGGGACAACCTCACACGTGCTTCACCGACTTCCCTGCGCCTGACGTCTCTCTCACTAGAAAGATAGGTGCTGAGTTTGTGGGGACTTTCATCCTCATATTCGGAGCGACAGCTGCGCCTATCGTCAACCAAAAGTACAATGGCGCTGAGACTCTGATCGGCAATGCAGCCAGCGCAGGGCTGGCGGTGATGATAGTGATCCTCTCCACCGGCCACATCTCCGGTGCCCACCTCAACCCGTCTCTCACCATCGCCTTTGCGGCTCTGCGCCACTTCCCTTGGGTGCAAGTTCCGGCTTACATTGCCGCCCAGGTTTCAGCCTCTATTTGTGCTTCCTTCGCGCTTAAAGGTGTCTTCCATCCGTTTATGTCCGGCGGAGTCACTACTCCGTCAGTTAGCACCGGCCAGGCATTTGCTATCGAACTCATCATCACTTTCAATCTCTTGTTTGTTGTTACTGCTGTGGCTACTGACACTCGAGCTGTGGGAGAGTTGGCAGGCATTGCAGTCGGCGCTACTGTTATGCTCAATATTCTAGTGGCCGGGCCGTCAACTGGGGGTTCGATGAATCCGGTGCGGACACTGGGGCCGGCAATTGCAGCCGGAAACTATCGAGATTTGTGGGTGTACTTGGTGGCACCGACCATCGGGGCACTGGCTGGGGCTGGAATCTACACTCTGGTAAAGCTCAAGGATGACGGGACTGAGCCTCCTCGCCCTAGGAGCTTCCGCCGCTAG 897 57.19 MQESEGGGTPTASAPATPISPGGPLFPSFRVDSMSYDRKPMPGCKCFPVNAPTWGQPHTCFTDFPAPDVSLTRKIGAEFVGTFILIFGATAAPIVNQKYNGAETLIGNAASAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTTPSVSTGQAFAIELIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYRDLWVYLVAPTIGALAGAGIYTLVKLKDDGTEPPRPRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 42617601 42620214 + Bma026254.1 Bma07g01058 86195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01058 298 MobiDBLite consensus disorder prediction 1 24 - -
Bma07g01058 298 Pfam Major intrinsic protein 69 278 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 CDD MIP 73 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 SUPERFAMILY Aquaporin-like 70 285 IPR023271 -
Bma07g01058 298 Gene3D Glycerol uptake facilitator protein. 65 290 IPR023271 -
Bma07g01058 298 MobiDBLite consensus disorder prediction 1 16 - -
Bma07g01058 298 PANTHER AQUAPORIN NIP2-1 10 292 IPR034294 -
Bma07g01058 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 10 292 - -
Bma07g01058 298 PRINTS Major intrinsic protein family signature 112 136 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 PRINTS Major intrinsic protein family signature 193 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 PRINTS Major intrinsic protein family signature 224 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 PRINTS Major intrinsic protein family signature 261 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 PRINTS Major intrinsic protein family signature 149 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma07g01058 298 ProSitePatterns MIP family signature. 130 138 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00930 Bma-Chr5:47301677 Bma07g01058 Bma-Chr7:42617601 5.65E-44 dispersed
Bma05g00938 Bma-Chr5:47420375 Bma07g01058 Bma-Chr7:42617601 4.27E-44 dispersed
Bma07g01058 Bma-Chr7:42617601 Bma13g00675 Bma-Chr13:17421809 8.15E-116 dispersed
Bma07g01058 Bma-Chr7:42617601 Bma01g01942 Bma-Chr1:71826589 7.71E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01058 K09874 - csv:101212651 503.827