Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01074 ATGGAGACCGAGGAGTACAGAGAGGAAAACCTGGTTGTCAGGGAGTTTCACGCAAATGGAGTTTCCATTAAAACAACAGAAGTTGAGGCAAAGCTAGATGAGGGAAATATTCAAGAGGCTGAATCTTCCTTGCGGGAAGGATTATCATTGAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGTAATGTGGAAGGTGCTCTTCGTGTGTTCGATGGCATTGATCTCCAAGCAGCAATTCAGAGATTGCAGCCTTCTCTTACTGAAAAAATGCCATCCAAAAAGGGCCGTCCTCGCACAGATTCGCAGCATGGAGTCTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACGGAGGCTGCTCATGAGTGTAAAAATGTGCTTGATGCTGTGGAGAAGATATTCTATCTGGGCATTCCCGATGTGCAAGTTGACAATAGATTGCAAGAGACAATAAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACGGGGGGGTTGCTACCAGGAAGCAGTTTCTGCCTATCGACGTGCGCTCTTGAGCCAATGGAACCTCGATAATGATTGCTCTGCAAGGATTCAGAAGGGATTTGCTGTCTTTCTGCTTTATGGAGGGGTAGAAGCTAGCCCTCCTAGTCTAGCAGTTCAGGTTGAGGGCTCATATATACCCAAAAACAATATGGAAGAGGCAATTCTACTTCTGATGATTCTTATGAGGAAATTTTTCCTTGGTAAGATCAACTGGGATCCATCTGTAATGGAGCATCTAACATTTGCACTATCTTTGTGCAGCCAAACTTCTGTTTTAGCTAAACAATTTGAAGAAATCATGCCTGGAGTATATCCCCGTGTGGATATTTGGAAGTCTTTAGCTCTGTGTTACAGTGGAGCAGGACAAAACAAATCTTCCTTAAACCTGTTGAGAAAGTCCTTACACAAACATGAAAAACCAGAGGATTTGCTGGCATTGTTAGTGGCTGCAAAGATCTGCAGTGAAGATTCTTATCTTGCTGCTGAAGGAGTTGGCTATGCCCGAAGGGCAGTCAGTAATGCAGTAGGGAAAGAAGAGCATTTGAAGAGTGTGGGCCTTCGAATGTTGGGTCTTTGTTTGGGAAAGCAAGCTAAGCTATCCTCCTCTGATTTTGAGAGGTCCCGCCTTCAGTCGGAGGCTTTGAAATCTCTAGATCAGGCAGCTTCTCTGGAGCGAAATAATTCCGATTTAAGTTTTGAATTGGGAGTTCAATATGCAGAACACAGGAATTTGACTGCGGCTTTGCATTATGCGAAGAAATATATTGATAAAACCGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGCTGTCTTCTCAAAAAAGATTTGCAGAGGCTGAAGTAGTCACTGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTTTCATGCTTAAAGCCAAGCTGAAGATATCTCAGTCACTACACATGGACGCTATTGAAACTTATCGATACCTCCTAGCATTAGTTCAAGCTCAAAGAAAATCGTTTGGACCACTTAAACTTCCAAATCGGGTTGAAGATGATAAGGTCAACGAATTTGAAATATGGCAAGGCTTGGCCAACTTATACGCCAGCCTTTCACATTGCAAAGATGCGGAGATATGTTTGGGAAAAGCTAGAGAGCTGAAACAATACTCGGCCGAAACGCTTCATACACAAGGTGTGATATGTGAAGGAAGTGGACAAATTCCAGAAGCTCTTGCTGCTTATATTAATGCTCTACTATTTGAGCCTGATTATGTTCCTTGCAAGATATTGATCAGTGCCCTTTTGACCAAAACCGGTTCGAAGTCGTTGCCAATTGTAAAATGCTTACTTTCCGACGCATTGAGGATCGATCCAACCAATAAGAAGGCTTGGTATTATTTGGGAATGATTCATAGGGACGACGGGAGAACAGCCGATGCTATCGATTGTTTTCAGGCAGCTTCGATGCTCGAAGAATCCGATCCAATCCAAAGTTTTGCCTCAATTCTCTGA 2091 43.09 METEEYREENLVVREFHANGVSIKTTEVEAKLDEGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSLTEKMPSKKGRPRTDSQHGVSQHAANLVLEAIYLKAKSLQKLGKLTEAAHECKNVLDAVEKIFYLGIPDVQVDNRLQETISQAVELLPELWKRGGCYQEAVSAYRRALLSQWNLDNDCSARIQKGFAVFLLYGGVEASPPSLAVQVEGSYIPKNNMEEAILLLMILMRKFFLGKINWDPSVMEHLTFALSLCSQTSVLAKQFEEIMPGVYPRVDIWKSLALCYSGAGQNKSSLNLLRKSLHKHEKPEDLLALLVAAKICSEDSYLAAEGVGYARRAVSNAVGKEEHLKSVGLRMLGLCLGKQAKLSSSDFERSRLQSEALKSLDQAASLERNNSDLSFELGVQYAEHRNLTAALHYAKKYIDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLFMLKAKLKISQSLHMDAIETYRYLLALVQAQRKSFGPLKLPNRVEDDKVNEFEIWQGLANLYASLSHCKDAEICLGKARELKQYSAETLHTQGVICEGSGQIPEALAAYINALLFEPDYVPCKILISALLTKTGSKSLPIVKCLLSDALRIDPTNKKAWYYLGMIHRDDGRTADAIDCFQAASMLEESDPIQSFASIL 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43211408 43216171 - Bma026279.3 Bma07g01074 86211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01074 696 ProSiteProfiles TPR repeat profile. 654 687 IPR019734 GO:0005515
Bma07g01074 696 Coils Coil 403 423 - -
Bma07g01074 696 PANTHER PROTEIN NPG1 4 695 IPR043376 -
Bma07g01074 696 Gene3D Tetratricopeptide repeat domain 289 494 IPR011990 GO:0005515
Bma07g01074 696 Gene3D Tetratricopeptide repeat domain 641 693 IPR011990 GO:0005515
Bma07g01074 696 PANTHER CALMODULIN-BINDING PROTEIN 4 695 - -
Bma07g01074 696 SUPERFAMILY TPR-like 500 683 IPR011990 GO:0005515
Bma07g01074 696 MobiDBLite consensus disorder prediction 92 111 - -
Bma07g01074 696 SMART tpr_5 654 687 IPR019734 GO:0005515
Bma07g01074 696 SMART tpr_5 304 337 IPR019734 GO:0005515
Bma07g01074 696 SMART tpr_5 120 153 IPR019734 GO:0005515
Bma07g01074 696 SMART tpr_5 584 617 IPR019734 GO:0005515
Bma07g01074 696 SMART tpr_5 460 493 IPR019734 GO:0005515
Bma07g01074 696 SMART tpr_5 550 583 IPR019734 GO:0005515
Bma07g01074 696 SUPERFAMILY TPR-like 120 446 IPR011990 GO:0005515
Bma07g01074 696 Gene3D Tetratricopeptide repeat domain 495 638 IPR011990 GO:0005515
Bma07g01074 696 Gene3D Tetratricopeptide repeat domain 18 203 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00760 Bma-Chr2:39226439 Bma07g01074 Bma-Chr7:43211408 0 dispersed
Bma06g01610 Bma-Chr6:52269087 Bma07g01074 Bma-Chr7:43211408 0 dispersed
Bma14g00190 Bma-Chr14:2430693 Bma07g01074 Bma-Chr7:43211408 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01074 K21843 - csv:101206641 1103.58