Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma07g01078 ATGCTAGTCGATGGGAAGATAGTGGCCGTGAAGAAATCGAAAAGGGTCGACGAAAGCAAGATAGAGGAGTTCGTCAATGAAGTCGTGATTTTGTCGCAGATCAATCACAGAAATATAGTGAAGCTGATGGGATGTTGTTTGGAGACGGAAGTTCCATTGCTAGTCTATGAGTTCATTCCAAATGGAACACTTTTTAACTATCTCCATCACCCAAATGAAGATGACCTTCCTCTAACTTGGAATATGAGAATGAGAATTGCCACTGAAATTGCAGGCGCCCTTTTCTACTTGCACTCTGCAGCCTCTCAGCCTATCTATCATAGAGACATAAAATCCTCCAACATTCTCTTGGACGAAAAATATCGGGCCAAAATAGCCGACTTTGGCACCTCAAGGTCGGTTGCCATCGACCAAACCCATGTCACCACCCAAGTGCAGGGCACTTTCGGCTACTTGGATCCCGAGTTCTTCCAATCCAGCCAATTCACCGAAAAGAGTGACGTTTACAGCTTTGGGGTCGTTTTGGCCGAGCTTTTGACTGGGCAAGCGCCGATTTCTACAAAGAGATTGATGGAAGGAACAAGTTTGGCCTTTTATTTCATTGATTCTATGAATGGAAACAAACTTTTCGACATTCTTGATAACAGAGTTATCAAGGAAGGCAAGCGAGAAGATATCATTCTAGTTGCGAACCTTGCAAAAAGGTGCATGAGCTTGACCGGAAGAGATCGGCCAACGATGAAGGAAGTTGTCGTGGAGCTCGATTCCGTCCAGATGACGCAAAAAGCGCTTGTCGTTGGAAATACTCAAGAAGTGGATGAATTTTTGATGACAGAAGAAACTCTGGCTTGGGAGGAAGACATTTCTATGTCAACAAGGTCTGATTTGAGTAGTGATACGTTTAGATTGTTACAACATTAA 921 43.65 MLVDGKIVAVKKSKRVDESKIEEFVNEVVILSQINHRNIVKLMGCCLETEVPLLVYEFIPNGTLFNYLHHPNEDDLPLTWNMRMRIATEIAGALFYLHSAASQPIYHRDIKSSNILLDEKYRAKIADFGTSRSVAIDQTHVTTQVQGTFGYLDPEFFQSSQFTEKSDVYSFGVVLAELLTGQAPISTKRLMEGTSLAFYFIDSMNGNKLFDILDNRVIKEGKREDIILVANLAKRCMSLTGRDRPTMKEVVVELDSVQMTQKALVVGNTQEVDEFLMTEETLAWEEDISMSTRSDLSSDTFRLLQH 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 43354142 43355062 + Bma026284.1 Bma07g01078 86215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma07g01078 306 PANTHER - 1 274 - -
Bma07g01078 306 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Bma07g01078 306 Pfam Protein tyrosine and serine/threonine kinase 7 254 IPR001245 GO:0004672|GO:0006468
Bma07g01078 306 SUPERFAMILY Protein kinase-like (PK-like) 4 254 IPR011009 -
Bma07g01078 306 Gene3D Transferase(Phosphotransferase) domain 1 59 281 - -
Bma07g01078 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Bma07g01078 306 SMART serkin_6 1 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01078 306 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 274 IPR045274 GO:0007166
Bma07g01078 306 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma07g01078 306 PIRSF ILK 3 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01078 Bma-Chr7:43354142 Bma07g01100 Bma-Chr7:44030119 0 dispersed
Bma07g01077 Bma-Chr7:43295906 Bma07g01078 Bma-Chr7:43354142 1.52E-65 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66624 PF07714 PK_Tyr_Ser-Thr 3.30E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma07g01078 - - qsu:112027313 407.142